Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq304 140 2e-28 seq151 138 8e-28 >seq304 Length=27364 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 25421 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 25362 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 25361 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 25327 >seq151 Length=50061 Score = 138 bits (152), Expect = 8e-28 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||||||||| |||||||||||||| ||||||||||| ||||| | | ||| | || Sbjct 37701 CAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCATC 37642 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || ||||| || || ||||| || | || |||||||| | || | || ||||| || Sbjct 37641 TTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTATC 37582 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || ||| ||| || || | | ||| || | ||||||||| || |||||||| Sbjct 37581 CTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAGT 37522 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || |||||||| || || || ||||||||| Sbjct 37521 CTTTCCGGTCAAGGTCTTGACAAAGATCTGCATG 37488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943554623083