Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq292 206 3e-48
>seq292
Length=28646
Score = 206 bits (228), Expect = 3e-48
Identities = 681/1046 (65%), Gaps = 12/1046 (1%)
Strand=Plus/Plus
Query 62846 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 62905
|| || ||||| ||||| || |||||||| ||||| || | ||||| ||||| || ||
Sbjct 10936 TGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTC 10995
Query 62906 TGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATCTCTT 62964
|| | ||||| ||||| | ||| | | || | ||||| | | | | ||| |
Sbjct 10996 TGTGCTTCTAGGATCGCATACCACAACTTCTGG-GCCTTGACCGTC--TGACGACCTCGT 11052
Query 62965 TTCTCTTTCGTATAGTGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGT 63022
||||||| ||| ||| ||| | ||||| || || || | |||| | ||
Sbjct 11053 CCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGG 11112
Query 63023 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63082
|| || |||| ||||| | || | ||| ||| || | || || ||| ||||
Sbjct 11113 CCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATG 11172
Query 63083 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63142
|| ||||| ||| ||||||| || ||| | || | || | | || || |||||
Sbjct 11173 AATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCG 11232
Query 63143 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63202
|||||| | || | || | | | | ||| | ||||| || |||| || |||
Sbjct 11233 TGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATG 11292
Query 63203 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63262
|| | | || || || || || || ||||| || | || | || ||||| || |
Sbjct 11293 GCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAG 11352
Query 63263 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCA 63322
|| | | ||| ||||| | ||||||||| || || |||||||| | |||||| |||
Sbjct 11353 ACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCA 11412
Query 63323 CTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63381
| |||||||| | | | | | || || || || || || | || ||||| | ||
Sbjct 11413 GTAGCACGAATGCAA-TGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGC 11471
Query 63382 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 63441
|| || | || || || || ||||| || || || || |||||| | | ||
Sbjct 11472 ACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAA 11531
Query 63442 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGT 63501
|| |||| ||| | | ||| || ||||| || | || ||||| ||||| ||
Sbjct 11532 GCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGT 11591
Query 63502 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63561
|| || || | || | || ||||| ||||| || || || || || | |||
Sbjct 11592 GAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATG 11651
Query 63562 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT-GTTTA 63620
|| || ||||| |||||||| | |||||| || ||||| || | | |||||| | |
Sbjct 11652 GATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCGGCCA-CTTGTTTGCCAA 11710
Query 63621 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63680
| || | || || ||| |||||||||| || || || || || | ||| |||||||
Sbjct 11711 TCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTC 11770
Query 63681 GTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAA 63740
| ||||||| || ||||||| || | ||| || | | |||| |||| |||
Sbjct 11771 GGTCGTAAACGATGGCCGAGTTCAGCTCATCAGCATGTCTCATAAC-ACATTCATACGTC 11829
Query 63741 TACTTGAA-ATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCC 63799
| || | | || |||||| | || ||| || || || |||| ||||| | | | ||||
Sbjct 11830 TCCTGGGAGATCATAGGAGAGTGCTTCTTGTTCTTGGGGTTGATATAGTAGTAGAGATCC 11889
Query 63800 TCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTA 63859
|| ||| | ||| |||| || || | ||||| ||||| || ||||| || |
Sbjct 11890 GACACCACCGAAGAGAATTGTTTCTTAGTCTGCTTGTGGAGATTGGACACGGCGATACGC 11949
Query 63860 GCGGCTAGAATGGCATAATCCGGATG 63885
|| || || ||||||||||| |||||
Sbjct 11950 GCTGCGAGGATGGCATAATCGGGATG 11975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633624927082800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |