Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq151 127 2e-24
>seq151
Length=50061
Score = 127 bits (140), Expect = 2e-24
Identities = 159/215 (74%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| ||||| || || |||||||| | |||||||| || ||
Sbjct 37261 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37320
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| ||||| || || || | || | ||| ||||| ||||| ||||| || |||
Sbjct 37321 GACACGATCGA--CAATGTAAAATCGAAGATTCAA-GACAAGGAAGGAATTCCGCCGGAC 37377
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| || | || || || || |||||||||||||| | ||| ||| | |||| ||
Sbjct 37378 CAACAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGCGACTAT 37437
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || || || || ||| | || ||
Sbjct 37438 AACATCCAGAAGGAGTCGACTCTCCATCTCGTCCT 37472
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| |||||||| || | || || | ||||| || || ||
Sbjct 37489 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACTATTACGTTGGAAGTTGAATCTTCG 37548
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || | ||| ||| ||| || ||||| || |||||||| || |||
Sbjct 37549 GACACTATTGACAACGTCAAGTCAAAGATCCAGGATAAAGAGGGTATTCCACCGGATCAA 37608
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||| ||||| ||||| ||||||| |||||| | || ||||||
Sbjct 37609 CAGCGATTGATCTTTGCAGGCAAGCAATTGGAAGATGGACGCACTCTTTCTGACTACAAT 37668
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
||||| || || ||| || ||||| ||| | || ||
Sbjct 37669 ATTCAGAAGGAGAGCACTCTGCATTTGGTGTTGAGACT 37706
Score = 118 bits (130), Expect = 9e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||| | ||||| || ||||||| | || || |||||
Sbjct 37033 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37092
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| || ||||| ||||| || ||| ||||| ||||| ||||| || ||||||
Sbjct 37093 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37152
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | |||||||||||||| ||| | ||||| | |||||| | | || |||||
Sbjct 37153 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37212
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| ||||||||||| || || ||
Sbjct 37213 ATCCAAAAAGAATCGACTCTTCA 37235
Score = 105 bits (116), Expect = 6e-18
Identities = 142/193 (74%), Gaps = 6/193 (3%)
Strand=Plus/Plus
Query 25021 TGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AA 25078
||||||| || ||||||| |||| || ||||| || || ||||| || || ||
Sbjct 36827 TGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGA--CAATGTAAA 36884
Query 25079 G-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCG 25137
| | || | ||| ||||| ||||| ||||| ||||| ||||| || | ||||| ||||
Sbjct 36885 GTCCAAGATTCAG-GACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCG 36943
Query 25138 GCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGC 25197
||||||| | || |||| ||||| || | |||||||| ||||| |||||||| ||
Sbjct 36944 GCAAACAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCT 37003
Query 25198 TACATTTAGTGCT 25210
| ||||| || ||
Sbjct 37004 TGCATTTGGTCCT 37016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433323283901795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |