Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq151 163 5e-35
seq82 138 2e-27
seq56 127 4e-24
seq49 111 3e-19
>seq151
Length=50061
Score = 163 bits (180), Expect = 5e-35
Identities = 158/203 (78%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || || ||||| || ||||||||||| ||| ||| || | || |||||||| ||
Sbjct 37463 TGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCTTCTAATTGT 37404
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || ||||| || | || ||||||||| || ||||| ||||||||||||||||||||
Sbjct 37403 TTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCTTGAATCTTC 37344
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
| || || ||||| ||||||| |||||| ||||||| |||||||| || || ||
Sbjct 37343 GATTTTACATTGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTCTTGCCAGTC 37284
Query 68439 AGGGTCTTGACGAATATCTGCAT 68461
| ||||||||| || || |||||
Sbjct 37283 AAGGTCTTGACAAAGATTTGCAT 37261
Score = 147 bits (162), Expect = 4e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||| ||| || || || |||||||||||||| || || |
Sbjct 37259 CCACCACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTG 37200
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | ||||| ||||| || ||||| | |||||||||||| |||
Sbjct 37199 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGA 37140
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413
|| ||||||||||| || ||||| | ||| || |||||||| || |||| | || ||
Sbjct 37139 ATACCTTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATC-GCTGGACTCGAC 37081
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || || || ||||||||||| || |||||
Sbjct 37080 CTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37033
Score = 118 bits (130), Expect = 2e-21
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | ||||| || | || || ||||| || ||||| |||||
Sbjct 37031 CCACCACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTC 36972
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | ||||| || | ||| || |||||||| ||||| | |||||| || || |||
Sbjct 36971 AAGGTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGA 36912
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|||||||||||||| |||||||| | ||| || |||||||| || ||| || || ||
Sbjct 36911 ATGCCTTCCTTGTCCTGAATCTTGGACTTTACATTGTCGATGGTATC-GCTGGACTCGAC 36853
Query 68414 TTCCAAGGTGATGGTTTTTCCCGT 68437
|| | ||||||||| || || ||
Sbjct 36852 CTCGAGGGTGATGGTCTTGCCGGT 36829
>seq82
Length=64492
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
||||||||||| ||||| ||||| | ||||| || | ||||| |||||||| ||
Sbjct 45252 TTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 45311
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| | |||||||| || || ||||||||||| ||||| ||||| | ||||||| |||
Sbjct 45312 AAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCG 45371
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | || || || || | ||||||||| || ||||||||||||||||||||
Sbjct 45372 ATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 45430
>seq56
Length=70628
Score = 127 bits (140), Expect = 4e-24
Identities = 329/499 (66%), Gaps = 2/499 (0%)
Strand=Plus/Minus
Query 176030 GCGCTTCACATTGTCTACGATATCCTTGGGGTTGTAAGCCGGAATGTTAGTGCTAAATCC 176089
|||||| | ||| || |||||||||| ||| |||||| || || || || | ||
Sbjct 38372 GCGCTTGAGATTCTCCACGATATCCTCGGGATTGTAATTGGGGATAGAAGAACTCCAGCC 38313
Query 176090 TGTTCCTATTCCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATTC 176149
|||||| || || | ||||| ||||| | | || | | || ||||| | ||
Sbjct 38312 TGTTCCGATACCGTCGGCACCATTGACCAGAATCATGGGAACGACTGGCACATATAACTC 38253
Query 176150 CGGTTCAATCCGGTCGCCGTCATCCTCGAGGTAGTTCAGCAGACGCTCGTCGGCCTTGTG 176209
|||||| ||| | | ||||||| | ||| ||| ||| | || || |||| |||
Sbjct 38252 CGGTTCGATCTTCTTGTCGTCATCAGTGTTGTAAGTCAAGAGAGGTTCATCAGCCTGGTG 38193
Query 176210 GAAAATATCCCGGGTGTTGGGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTC 176269
||| | | ||||| | ||| ||||| | ||||| ||||| | ||| ||| |||
Sbjct 38192 GAAGAGCTTCCGGGCGAAGGGAGACAGACGGGTGAAAATATATCGAGCGCTAGCAGAGTC 38133
Query 176270 CTTGCCTCCGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATT 176329
| ||||| ||| || | ||||| || ||| || ||||| |||| || ||
Sbjct 38132 GCTACCTCCTTGATTTCGCGTGCCGAACTGGCCGGATGGCTCGAGCAAGTTGACATTGTT 38073
Query 176330 CGAACCCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTG 176389
|| || || | | ||| |||| || || |||| |||||| ||||||||||||||
Sbjct 38072 GGATCCGACAAAATTTTGAGCCAGACCAACGATGGTCTGCTGGAGCGACGCCTCGCCGTG 38013
Query 176390 GTGAT-AGCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGTA 176448
|||| ||||| | ||| ||| ||||| | | |||||||| || ||||
Sbjct 38012 ATGATAAGCCGTCATTC-CACCGACAAGACCGGCGAGTTCGGCGACTTTCATATCTTTCT 37954
Query 176449 CGAGGTTGCGCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGA 176508
| ||| || || || | ||||| || ||| ||||| ||||||| |||||||
Sbjct 37953 TCAAGTTTCGTTTGAAGCAAGCGAACATAACCTTTCGCTGACCAGGCTTCAACCCATCGA 37894
Query 176509 CGACCGACGGAATGGAACG 176527
| || || || || || ||
Sbjct 37893 CAACAGAGGGGATCGATCG 37875
>seq49
Length=72059
Score = 111 bits (122), Expect = 3e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
|||||| || ||||||| |||| ||| | ||| ||||| || || ||||| || |||||
Sbjct 34558 TCCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGA 34617
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
|| || | |||||||| | ||||| |||||||| || || | ||| ||||| || ||
Sbjct 34618 CAGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGG 34677
Query 68354 AATGCCTTCCTTGTCT 68369
|||||||||||||||
Sbjct 34678 GATGCCTTCCTTGTCT 34693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921612112389960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |