Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq292 170 4e-37
seq201 104 4e-17
>seq292
Length=28646
Score = 170 bits (188), Expect = 4e-37
Identities = 746/1152 (65%), Gaps = 40/1152 (3%)
Strand=Plus/Plus
Query 244300 CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGG 244359
|||||| ||| |||| || | || | ||| ||||||||||| |||||| |||||
Sbjct 10470 CCACATATCATACTGAAGGATACCTTGTGAGACCGGGCTGCCCTCATAGGTCTCATAGGG 10529
Query 244360 ACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTCGAGGGCGGCGTAGTAGATGGTCTCGA 244418
||| | || ||| || | || | | ||| || || || | ||||||||| ||||
Sbjct 10530 ACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTC-AGAGCTGCATGGTAGATGGTTTCGA 10588
Query 244419 AGATCATCTTGTTCATGTCGCGGGCCT-TGCCGCAGGTGAAGGG--GATGCCCATCATCA 244475
| || |||| | | ||||||| || | || ||| || || || | || |
Sbjct 10589 AAATTTGGATGTTGAGTTGACGGGCCTCTGGAG-AGTCGAAAGGAAGACGCAAAGCA--A 10645
Query 244476 TGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGC 244535
|||| | || || || ||||| || || | || | |||| |||||| ||||
Sbjct 10646 GGAAGGCATCTGCAAGACCCTGAACACCAAGACCAACAGGTCGGTGTCGGAAGTTGCTCT 10705
Query 244536 GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGA 244595
| ||||||||||||| ||||| ||||| ||||| | |||||| | ||| || ||||
Sbjct 10706 TCCTGGCTTCGGGCACAGGGTAGTAGTTGATATCGATGATCTTGTTCAAGTTTCGAGTGA 10765
Query 244596 TCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGG 244655
| || || || || | |||||| || || |||||| | |
Sbjct 10766 CGACTTGGGTAACTTCATGAAGACGGCCAAAGTCATATTCA-------CCTCGG-GCT-- 10815
Query 244656 TGATCCTCACAAACTCGTTG--AGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTC 244713
||||| || || |||| || || | ||| || |||||||| || | ||| ||
Sbjct 10816 TGATCG--ACGAAG--GTTGGAAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCATC 10871
Query 244714 CGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTG 244773
| | |||||| |||||| || ||||| || || || | ||| || |||||||
Sbjct 10872 TGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGGTT 10931
Query 244774 CTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTC 244833
|| || ||| ||| ||||||||| |||||||| ||||| | || ||| |||||
Sbjct 10932 CTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCAGTCTC 10991
Query 244834 GAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCT 244892
| ||| || | |||| ||| | ||| | | | |||||||||||| ||| |||
Sbjct 10992 GGTCTGTGCTTCTAGGATCGCA-TACCACAACTTCTGGGCCTTGACCGTCTGACGA-CCT 11049
Query 244893 TG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCT 244951
| |||||| ||| || | || ||||| ||||| || ||| |||| || |
Sbjct 11050 CGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCA 11109
Query 244952 AGGCCGGG-GCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCC-TCT 245009
||||| || || | | || || | ||| |||| || | | || ||| | |||
Sbjct 11110 AGGCCCGGTGCCTCATGA-GGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCT 11168
Query 245010 GCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCG 245069
|||||| || || || |||| || || | || | ||| | || | ||| |||
Sbjct 11169 -CATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCT 11227
Query 245070 AGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGT 245129
|| |||||| ||||| | || | || ||||| || ||||||| ||||||| |
Sbjct 11228 TTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGAT 11287
Query 245130 AGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CG 245188
||| || | ||| ||||| ||||| ||||| |||||||||| ||| || | |
Sbjct 11288 AGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCA-CATAACGGGCAGTGTTG 11346
Query 245189 TTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAG 245248
||||||| || || | || | | || || || ||||||||| || || |||
Sbjct 11347 TTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAG 11406
Query 245249 GCGCCCTTGCCCCTGAGGTTGC--TGA-TGGACATGCCTAGTCCGCCGGCGTGCTTGGAG 245305
| || | | | | ||| ||| | | ||| | ||||| || |||||||
Sbjct 11407 GAACCAGTAGCAC---GAATGCAATGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAG 11463
Query 245306 ATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTG 245365
|| | || || |||||| ||||| || ||||| ||||||||| ||||||| |
Sbjct 11464 ATCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCG 11523
Query 245366 AGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTG 245425
| || ||||| ||||||| || || | || ||| | ||||||||||| || |
Sbjct 11524 ACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAG 11583
Query 245426 GCGTGGGTAAAG 245437
|||||||| |||
Sbjct 11584 GCGTGGGTGAAG 11595
>seq201
Length=168916
Score = 104 bits (114), Expect = 4e-17
Identities = 371/583 (64%), Gaps = 64/583 (11%)
Strand=Plus/Minus
Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAG 42677
||||| || || || ||||||||| |||||||| |||||||| | || ||||||
Sbjct 78224 GCCATTGATACTATCCCCTGCATCCGCAAGAAGGCTGACTGGGCCTTGAAGTGGATCTC- 78166
Query 42678 AGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTT 42736
|| | | | | | |||| | | | || || || || | |||||||| ||||| ||
Sbjct 78165 AGACAAGGAGTCTAGCTTCGCCCAACGCCTCGTCGCATTCTCTGCCGTCGAAGGCATTTT 78106
Query 42737 CTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA--AGCAGAAGG--TGT--------- 42783
|||||| ||| | |||||||||||||||||||| | |||| |||| |||
Sbjct 78105 CTTCTCCGGCTCATTCGCCTCCATCTTCTGGCTGAAGAGCA-AAGGCATGTAATGCTCCA 78047
Query 42784 -------------------------------------CGATGCCCGGACTCACCTTCTCG 42806
||||| || | || ||||||
Sbjct 78046 ATAATAGACATGTTCTTATGCTAATCTCTTACAGGCCTTATGCCAGGCTTGACGTTCTCG 77987
Query 42807 AACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCG 42866
|| || |||||| | || ||||| |||||| |||||||| || || ||| | |
Sbjct 77986 AATGAGCTCATCTCGCGTGATGAGGGTATGCATACCGACTTTGCTTGTCTTCTGAT---G 77930
Query 42867 AGCCACCTCAGGCACAAGCCC--TCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCG 42924
||||||| | | |||||| || | | | || || ||||||||| ||||| |
Sbjct 77929 CAACACCTCAAGTATAAGCCCGATCCCA--AACTCATCGAGGACATCATCACCGAGGCTG 77872
Query 42925 TGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACC 42984
| | ||||||||||| || | || | | |||| || | ||| | |||||||||
Sbjct 77871 TTGTCATCGAGAAGGAATTTTTGACAGATGCTTTGCCTGTCGCTCTGCTTGGCATGAACG 77812
Query 42985 ACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT--GTGCCAGATGGG 43042
| | || ||| | || || ||| ||| ||||||| ||| || |||| | ||
Sbjct 77811 CCAAACTGATGCAACAATATATTGAGTTCGTTGCCGACCGTCTTCTCCTTGCC--CTCGG 77754
Query 43043 TCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGA 43102
|| |||||| | | | || ||| ||||||||| |||||||| ||||
Sbjct 77753 AAACAAGAAGTACTACAATGCCCAGAATCCTTTCAGCTTTATGGACAACATCTCATTGGC 77694
Query 43103 GGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
||| ||||| ||||| ||||||||||| |||| || ||||||
Sbjct 77693 GGGAAAGACAAACTTCTTCGAGAAGCGTGTCGGTGATTACCAG 77651
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944328658813680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |