Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq151 100 2e-16 seq49 82.4 6e-11 >seq151 Length=50061 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 33915 CAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-ATTGTCGCTCGT 33973 || ||||| ||| || ||||||||||||||||| ||||| || | | | || || | | Sbjct 37701 CAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTG-CGTCCAT 37643 Query 33974 CGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTTGT 34033 | |||||||||||||| ||||| |||| ||||| |||||| || | | |||||| | Sbjct 37642 CTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTAT 37583 Query 34034 CCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTTATTG 34093 || || ||| ||| | | | | | || | |||||| ||| | ||| || | Sbjct 37582 CCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAG 37523 Query 34094 TTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | |||||||| | || || |||||||| ||||| Sbjct 37522 TCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 37489 >seq49 Length=72059 Score = 82.4 bits (90), Expect = 6e-11 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| | ||| ||||| ||||| || | ||| |||||||||||||||||| || | | Sbjct 34559 CCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGAC 34618 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | | || || | || || | |||||||||||| || |||||||| ||||| || Sbjct 34619 AGAGTG-CGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTC 34671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397058078596186