Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq151 154 3e-32
seq82 100 7e-16
seq56 100 7e-16
seq201 87.8 4e-12
>seq151
Length=50061
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| || ||||| | || | ||| | ||||| || || || ||||| |||||
Sbjct 37718 TGACCACCACGAAGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCA 37659
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| || |||||||| ||||| ||||| || ||||| ||||||| ||||||||| |
Sbjct 37658 GAAAGAGTGCGTCCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGT 37599
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || |||||||||||||| || | || ||||| || |||| || |||||
Sbjct 37598 GGAATACCCTCTTTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCA 37539
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | ||| || ||||| ||||||| |||||||| || ||||||||
Sbjct 37538 ACTTCCAACGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 37489
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || || |||| || |||||||||||| || ||||| |
Sbjct 37259 CCACCACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTG 37200
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | ||| || || || || || ||||| ||||| ||
Sbjct 37199 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGA 37140
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || |||||||| || | ||||| || || || | |||||| || || ||
Sbjct 37139 ATACCTTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGACC 37080
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| ||||| |||||||||||||| || |||||
Sbjct 37079 TCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37033
Score = 136 bits (150), Expect = 9e-27
Identities = 170/232 (73%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| || | || || |||||||| | || || || ||||| |||||||
Sbjct 37491 CATG-CCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGT 37433
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
|| ||| || || |||||||||||||||||||| |||||||||| || |||||
Sbjct 37432 CGCTGAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCG 37373
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
|| |||||||| || || || || |||| ||| || || || || | || ||||
Sbjct 37372 GCGGAATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATT 37313
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| ||||| || ||||| ||||| || |||| |||||||| || || |||||
Sbjct 37312 CCACTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37261
>seq82
Length=64492
Score = 100 bits (110), Expect = 7e-16
Identities = 140/195 (72%), Gaps = 1/195 (1%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|||||||| || || || || || || || || || | ||| || || |||||||||
Sbjct 45252 TTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 45311
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
| |||||||| ||||| ||||| ||||| ||||| || | || ||||| ||
Sbjct 45312 AAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCG 45371
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAT 288465
|| | |||| ||| || || || || ||||| ||||| || || || |||||||||||
Sbjct 45372 ATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 45431
Query 288466 ATCTGCATT-ATGTT 288479
| ||| || |||||
Sbjct 45432 CTGTGCGTTCATGTT 45446
>seq56
Length=70628
Score = 100 bits (110), Expect = 7e-16
Identities = 249/370 (67%), Gaps = 10/370 (3%)
Strand=Plus/Minus
Query 325964 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 326023
||||| || ||||| || | | ||||||| |||||||| || ||| | |||||| |
Sbjct 37492 ACGATCGGGGTGATAAATTCCACCAAGAACTTTGGAATTTGGAGCAGACT-GGGAAATTG 37434
Query 326024 --CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 326081
|| || || || || || | | || ||||||| |||| ||| |||| || |
Sbjct 37433 AACT-TGCAAGAAATTAATCAACAAGCCTTTAATGTGACTTCCATCATGATCCTGATCTG 37375
Query 326082 TCATGATCATCACATGACCGTAACGAAG--CGAGGACGTGTCTTTGTACACTTTACCGGT 326139
|||||||||||| || || || ||||| || || || || |||| ||||| |
Sbjct 37374 TCATGATCATCAAGTGTCCATAGCGAAGGCCGTGG--GTATCGGTGTAGACTTTCTTGTG 37317
Query 326140 TTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCA 326198
|| || ||||| | | ||||| | ||| || || ||||||| | ||| | |
Sbjct 37316 CTGGAGACCGAGGAAGTTTTTGATGTTCTG-AATCTCGGCGTTCTTTGAGATCTGATCAA 37258
Query 326199 CGGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGC 326258
| ||||| || ||||| ||||| ||||| || || || || || || ||| | |||
Sbjct 37257 CTGATGCGTCTCGGACATTCAAAAGTTTACCGCGCAGGGGAAAGACGCCAAACAAATCGG 37198
Query 326259 GACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAA 326318
|||| || || || | || || |||||||| || ||||| ||||| ||||| |
Sbjct 37197 GACCAACGACCGATCGTCCGGCCATTGCAAGACCTTTGGCAGAATCTCCCTCAGTCAGTA 37138
Query 326319 TGAGAGTGCA 326328
| | |||||
Sbjct 37137 TCAAGGTGCA 37128
>seq201
Length=168916
Score = 87.8 bits (96), Expect = 4e-12
Identities = 126/178 (71%), Gaps = 0/178 (0%)
Strand=Plus/Minus
Query 269147 CTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTA 269206
|| || | || ||||| ||| | || ||| | |||||||| || ||||| || || |||
Sbjct 77829 CTCTGCTTGGCATGAACGCCAAACTGATGCAACAATATATTGAGTTCGTTGCCGACCGTC 77770
Query 269207 TCTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGG 269266
| || || ||||| | |||| |||||| | ||||||| ||| ||||||||
Sbjct 77769 TTCTCCTTGCCCTCGGAAACAAGAAGTACTACAATGCCCAGAATCCTTTCAGCTTTATGG 77710
Query 269267 AACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324
| || || | | |||||||| ||||||||||| ||||||||| | || || ||
Sbjct 77709 ACAACATCTCATTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTGTCGGTGATTACCA 77652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179640902910454
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |