Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq56 113 1e-19
seq5 107 4e-18
seq201 102 2e-16
>seq56
Length=70628
Score = 113 bits (124), Expect = 1e-19
Identities = 365/558 (65%), Gaps = 18/558 (3%)
Strand=Plus/Minus
Query 297169 ACCTTTGAATCCTCGATACCACGGTTTCAT----TTCGACGAGATCTTCTCCAGCAATCA 297224
||| |||||||| ||| |||| |||| ||| ||| || ||||| || || ||
Sbjct 38429 ACCCTTGAATCCACGAAACCATGGTTGCATGGGCTTCCAC----TCTTCACCCGCCATTT 38374
Query 297225 ATCGCTTCACGTTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAAC 297284
||||| | || || ||||| || | ||||||||| | |||||| || ||| |
Sbjct 38373 TGCGCTTGAGATTCTCCACGATATCCTCGGGATTGTAATTGGGGATAGAAGAACTCCAGC 38314
Query 297285 CGGTACCGATTCCACTCGAACCATTCACCAGAATGCTCGGAATAACAGGCACATAATACT 297344
| || ||||| || | |||||| |||||||| | |||| || |||||||| |||
Sbjct 38313 CTGTTCCGATACCGTCGGCACCATTGACCAGAATCATGGGAACGACTGGCACATATAACT 38254
Query 297345 CTGGTTCGATCTTGTCACCGTCATCATACAGATATTTCAGAAGATTATCGTCCGTATCGA 297404
| ||||||||||| | |||||||| || ||| ||| || || | | |
Sbjct 38253 CCGGTTCGATCTTCTTGTCGTCATCAGTGTTGTAAGTCAAGAGAGGTTCATCAGCCTGGT 38194
Query 297405 CGAAAACCTGTCGAGTCTGAGGG-TTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGA 297463
||| | || || | | |||| ||| |||||||||||||| || || ||
Sbjct 38193 GGAAGAGCT-TCCGGGCGAAGGGAGACAGACGGGTGAAAATATATCGAGCGCTAGCAGAG 38135
Query 297464 TCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTA 297523
|| |||| || || || || ||||||||||| ||| | | |||||| ||
Sbjct 38134 TCGCTACCTCCTTGATTTCGCGTGCCGAACTGGCCGGATGGCTCGAGCAAGTTGACATTG 38075
Query 297524 TTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCA 297583
||| ||||||| ||| || || || ||||||||| || || || || |||||
Sbjct 38074 TTGGATCCGACAAAATTTTGAGCCAGACCAACGATGGTCTGCTGGAGCGACGCCTCGCCG 38015
Query 297584 TGGTGAT-AGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGT 297642
|| |||| || || || | | | || |||| || | || || |||| || |
Sbjct 38014 TGATGATAAGCCGTCATTC-CACCGACAAGACCGGCGAGTTCGGCGACTTTCATATCTTT 37956
Query 297643 CGTCAAATTGCGCTTGA---AAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACC 297699
| |||| || || |||| |||| ||| ||| || || || ||| ||| || || ||
Sbjct 37955 CTTCAAGTTTCGTTTGAAGCAAGC-GAACATA--ACCTTTCGCTGACCAGGCTTCAACCC 37899
Query 297700 ATCAACGACCGACGGAAT 297717
||| || || || || ||
Sbjct 37898 ATCGACAACAGAGGGGAT 37881
Score = 104 bits (114), Expect = 5e-17
Identities = 250/370 (68%), Gaps = 10/370 (3%)
Strand=Plus/Minus
Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 298144
||||| || ||||| || | | ||||||| |||||||| || ||| | |||||| |
Sbjct 37492 ACGATCGGGGTGATAAATTCCACCAAGAACTTTGGAATTTGGAGCAGACT-GGGAAATTG 37434
Query 298145 --CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 298202
|| || || || || || | | || ||||||| |||| ||| |||| || |
Sbjct 37433 AACT-TGCAAGAAATTAATCAACAAGCCTTTAATGTGACTTCCATCATGATCCTGATCTG 37375
Query 298203 TCATGATCATCACATGACCGTAACGAAG--CGAGGACGTGTCTTTGTACACTTTACCGGT 298260
|||||||||||| || || || ||||| || || || || |||| ||||| |
Sbjct 37374 TCATGATCATCAAGTGTCCATAGCGAAGGCCGTGG--GTATCGGTGTAGACTTTCTTGTG 37317
Query 298261 TTGAAGGCCGAGAATTTGTTTGAGCGCTGTGATT-TCTTCGTTCTTCGTGATGCTTGCCA 298319
|| || ||||| | | ||||| | | ||| | || ||||||| | ||| | |
Sbjct 37316 CTGGAGACCGAGGAAGTTTTTGAT-GTTCTGAATCTCGGCGTTCTTTGAGATCTGATCAA 37258
Query 298320 CGGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGC 298379
| ||||| || ||||||||||| ||||| || || || || || || ||| | |||
Sbjct 37257 CTGATGCGTCTCGGACATTCAAAAGTTTACCGCGCAGGGGAAAGACGCCAAACAAATCGG 37198
Query 298380 GACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAA 298439
|||| || || || | || || |||||||| || ||||| ||||| ||||| |
Sbjct 37197 GACCAACGACCGATCGTCCGGCCATTGCAAGACCTTTGGCAGAATCTCCCTCAGTCAGTA 37138
Query 298440 TGAGAGTGCA 298449
| | |||||
Sbjct 37137 TCAAGGTGCA 37128
>seq5
Length=88410
Score = 107 bits (118), Expect = 4e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 332810 AATGATCACGACACCTCCACCAAAGTTCTTAAGTGCTTCGGCCATTGCTCCGAGACTCTC 332869
|||||| || ||||| || |||| | ||| || || | || || || || || ||
Sbjct 50364 AATGATGACTACACCACCCTCAAACTCCTTGAGAGCCTTGGACAGAGCGCCCAGCGAGTC 50423
Query 332870 ACGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGTTGTTGCCATAGAGC 332929
||||||| | ||||||||||||| || | |||||||| ||| || |||||||| | ||
Sbjct 50424 CCGGTCAAGGTAGTTGGTCGGTTCATCGAGAACGATCAAGTGAGGACGTTGCCAT-GTGC 50482
Query 332930 -AGCGCCGATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGAATGAG 332988
||| ||| ||| | || | ||||| ||||| |||||||| |||||||| ||||
Sbjct 50483 AAGCAGCGAGAACGACCTTGACACGCTGCCCACCAGACAGACCACGCATGCGAGAGTGAG 50542
Query 332989 TTGTAAATTCAGGGTCGAGACCAACATTTGC 333019
| | ||| | ||||||||| | ||| ||
Sbjct 50543 AGATGAGTTCCGCGTCGAGACCGAAATTGGC 50573
>seq201
Length=168916
Score = 102 bits (112), Expect = 2e-16
Identities = 171/240 (71%), Gaps = 8/240 (3%)
Strand=Plus/Minus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGC--GACGCTATTCCATGCC 243559
|||||||| || || |||| | ||| |||||||| |||| || ||| | || || |
Sbjct 77887 ATCATCACCGAGGCTGTTGTCATCGAGAAGGAATT--TTTGACAGATGCTTTGCC-TGTC 77831
Query 243560 GG-CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGC 243618
| || ||||||||||| | |||| ||| ||| || || || ||||| ||||||||
Sbjct 77830 GCTCTGCTTGGCATGAACGCCAAACTGATGCAACAATATATTGAGTTCGTTGCCGACCGT 77771
Query 243619 ATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATG 243678
|| || | || || || | |||| ||||| || |||| || || |||||||
Sbjct 77770 CTTCTCCTTGCCCTCGGAAACAAGAAGTACTACAATGCCCAGAATCCTTTCAGCTTTATG 77711
Query 243679 GAGCTCATTTCGCTTCAAGGGAAA-ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737
|| ||| || || |||||| || ||||||||||| ||||||||| ||||||| ||
Sbjct 77710 GACAACATCTCA-TTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTGTCGGTGATTACCA 77652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102867381329550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |