Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq151 109 6e-19 >seq151 Length=50061 Score = 109 bits (120), Expect = 6e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 |||||||||||||| ||||||||||| ||||||||||| |||| ||||| || | || Sbjct 37701 CAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCATC 37642 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || | ||||| || || || || | |||||| || || | ||| | | ||| || || Sbjct 37641 TTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTATC 37582 Query 42116 CATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 42174 | ||| ||| |||| ||| | | | ||||| ||||| || || | ||| || | Sbjct 37581 CTGGATCTTTGACTTGA-CGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAG 37523 Query 42175 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || || | ||||| |||||||| ||||| Sbjct 37522 TCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 37489 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || ||||| || ||||| ||| ||||| || |||| || || ||||| || || || Sbjct 37223 TCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAA 37164 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| || || ||||||| || | | ||||||||| ||| || || | | Sbjct 37163 ATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTGGACTTCACATTG 37104 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | || ||||| || || || || | |||||||| ||||| || || ||||| || Sbjct 37103 TCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACG 37044 Query 42198 AAGATTTGCAT 42208 ||||||||||| Sbjct 37043 AAGATTTGCAT 37033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543206736387120