Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq151 154 1e-32
seq49 82.4 8e-11
>seq151
Length=50061
Score = 154 bits (170), Expect = 1e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || |||| |||||||||||||| |||||||| || || ||||| ||||
Sbjct 37245 AAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTC 37186
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||| || |||||||||||| ||||||| || || |||||||||||||| ||||| || ||
Sbjct 37185 TTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTC 37126
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| ||| || | ||||| | || || || || | ||| | |||
Sbjct 37125 CTGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGT 37066
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||||||| | ||| || ||||| ||||||||
Sbjct 37065 CTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37033
Score = 111 bits (122), Expect = 2e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || | ||| | || |||||||| |||||||||||||| | |||||| | ||
Sbjct 37017 AAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCATC 36958
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| ||||| |||||||| ||||||| || || || || |||||||| ||||| || ||
Sbjct 36957 CTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTC 36898
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||||||| || | ||||| | || || || || | || | |||
Sbjct 36897 CTGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGT 36838
Query 64411 CTTGCCGGTCA 64421
|||||||||||
Sbjct 36837 CTTGCCGGTCA 36827
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || ||||||| || || ||||| | ||||| || || || ||||| || || |
Sbjct 37487 CCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTG 37428
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || || ||||||| | || || || || | || | || || ||||| || |||
Sbjct 37427 AGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGA 37368
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|||||||| || ||||| || || |||||| || | || || | ||||||
Sbjct 37367 ATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACT 37308
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | ||||||||| ||||| || || || || ||||||||
Sbjct 37307 TCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37261
>seq49
Length=72059
Score = 82.4 bits (90), Expect = 8e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || || | ||| || || || ||||||||||| || | | ||||| | |||
Sbjct 34574 AGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCT 34633
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||| ||||||||||| | || || || |||||||| ||||| || ||||| || |||
Sbjct 34634 TCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 34693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499639222714920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |