Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq292 215 6e-51 >seq292 Length=28646 Score = 215 bits (238), Expect = 6e-51 Identities = 928/1448 (64%), Gaps = 33/1448 (2%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || ||||| |||||| ||||||| || | ||||| || | Sbjct 9964 CGGAGGTAGTACATTCCAGTCTTCAGCCCCATCTTCCAGCCAGCGAAGTGCATGGATGTG 10023 Query 115618 AACTTGGAGAGTGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGA 115675 | |||| | || || ||| ||| || ||| | | |||||||||||| |||| Sbjct 10024 ATCTTGCCCATAGTGGGCTCCTTGAGATG--GATGTTGAGAGATTGGGATTGATCAATGA 10081 Query 115676 AGCGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTT 115734 | || || || || ||||| | | || | | | || ||||||||| || || Sbjct 10082 AAGCACCACGGTCAGCAGCCATCTGGAGGACGGTGCGTTGGCT-GATTTCCCAGACCGTC 10140 Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794 |||| || || || ||| | ||||| | ||| || || || ||||| ||| || Sbjct 10141 TTGTATAGAGCTTTGATGTCAGCAGGGATGTTGGGGATGTTCTGAATGGAGCCGCCTTCC 10200 Query 115795 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACG 115854 | || | |||||| | | ||||||||||||| | | ||||| || | Sbjct 10201 GCAATGATTCTGTTCTTCATGTTGTCGGACCAGAGACCAAGGTCAACCAAATCCTTCAAG 10260 Query 115855 AGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTC 115914 || |||||| || || ||||| || | || | |||||||||| | Sbjct 10261 AGCCAGGGATTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGAC 10320 Query 115915 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 115974 ||||||||||| ||||| || ||||| ||||||||||| | ||||| || || ||||| Sbjct 10321 GTGTATGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATA 10380 Query 115975 GGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCC 116034 || || | || || |||||| | ||| ||| | || | || ||| Sbjct 10381 GGGGCAACAAGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCTTTCAATGCATCC 10440 Query 116035 CAGTCGTAGTTGAGCTTT-GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGA 116093 || || | | || || | | | |||||||||| |||| ||||||||||| || Sbjct 10441 CAATCCCA-TAGATCTGAAGGAGTAACATTCCACATATCATACTGAAGGATACCTTGTGA 10499 Query 116094 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC 116153 | || |||||| | |||||||| || || | ||| || | |||| | ||| Sbjct 10500 GACCGGGCTGCCCTCATAGGTCTCATAGGGACCTTGTTCCTTGGCGAGTTCGCATGACGC 10559 Query 116154 CTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGT 116212 || ||||| || || || || || ||||| | || | ||| | |||||| Sbjct 10560 AGTCAGAGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGACG-GGCCTCTG 10618 Query 116213 CGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGC 116272 || || || | ||||| | || || |||| || ||||| || ||||| || | Sbjct 10619 GAGAGTCGAAAGGAAGACGCAAAGCAAGGAAGGCATCTGCAAGACCCTGAACACCAAGAC 10678 Query 116273 CAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTAT 116332 ||| || || |||| | || ||| | || ||| || || | || ||| Sbjct 10679 CAACAGGTCGGTGTCGGAAGTTGCTCTTCCTGGCTTCGGGCACAGGGTAGTAGTTGATAT 10738 Query 116333 CGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAAT 116392 |||| | | | || | ||| ||||| || | || | ||||||||| | | | Sbjct 10739 CGATGATCTTGTTCAAGTTTCGAGTGACGACTTGGGTAACTTCATGAAGACGGCCAAAGT 10798 Query 116393 CAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 116449 || | || || | ||| || ||| | | ||||| || | || || ||||| | Sbjct 10799 CATATTCACCTCGGG---CTTGATCGACGAAGGTTGGAAGAGCCAGAGAGGCGAGATTGC 10855 Query 116450 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCT 116509 | |||| | ||||||| || ||||||| | ||||||||| |||| ||| || ||| Sbjct 10856 AGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCC 10915 Query 116510 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATAT 116569 || || |||| |||||| || || ||| |||| || ||||||||||| ||||||| Sbjct 10916 GGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAT 10975 Query 116570 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA-TACATCGGCGGCTGGC 116628 | || ||||| ||||| || || | | || || || | ||| || || | | || | Sbjct 10976 AAGGAGTCCCAGTCTCGGTCTGTGCTTCTAGGATCGCATACCACAACTTCTGGGCCTTG- 11034 Query 116629 ACAG--TGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTT 116686 || | || || |||| ||||| | ||| |||| | |||||||| || || || | Sbjct 11035 ACCGTCTGACG--ACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCT 11092 Query 116687 CACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCA 116745 | ||| || | || | || || ||||||| || |||||||| |||| ||| | Sbjct 11093 C-GCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGG 11151 Query 116746 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGA 116805 || ||| || || ||||||| || || || |||| || || | || | || || Sbjct 11152 TTCTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGG 11211 Query 116806 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 116865 |||| | ||||| | || || || | || | || | || | || ||||||| Sbjct 11212 GCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCG 11271 Query 116866 TGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTT 116919 ||||| || ||||| || | || | | || | |||| ||| |||||| Sbjct 11272 TGCCATGGCTCCAGATAGATGGCAAAGGCACC---GGGACGCTTATTGCCACCCTGGTCC 11328 Query 116920 ACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCA 116979 ||||| | || || ||| || || |||||||| ||||||| ||||| || ||| Sbjct 11329 ACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCG 11388 Query 116980 TTTGTCCC 116987 || ||||| Sbjct 11389 TTGGTCCC 11396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613500351725880