Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq151 116 9e-21 seq49 95.1 3e-14 seq82 84.2 5e-11 >seq151 Length=50061 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || ||||||||||||||||| |||| ||| ||||| | ||| | || ||| Sbjct 37472 AGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCT 37413 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | || ||||| |||||||| | || || |||||||| ||||||||| || Sbjct 37412 TCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCT 37353 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| || || |||| ||||||| || ||| || |||| ||||| ||| Sbjct 37352 TGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTC 37293 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || ||||| ||||| Sbjct 37292 TTGCCAGTCAAGGTCTTGACAAAGATTTG 37264 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| || | || ||||| |||||| || | |||||||||| | ||| Sbjct 37709 CGAAGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTG 37650 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||| ||||| || || ||||| | ||||| || ||||| ||| || Sbjct 37649 CGTCCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCC 37590 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||| |||||| ||| ||| || | ||||| | | ||| || |||||| Sbjct 37589 TCTTTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAAC 37530 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || | || || ||||| || || Sbjct 37529 GTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTG 37492 >seq49 Length=72059 Score = 95.1 bits (104), Expect = 3e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| ||||| | || |||||||| || | ||||||||| | || ||| Sbjct 34565 CGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGACAGAGTG 34624 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || ||||| ||||||||||| || || |||||||| ||| || ||| Sbjct 34625 CGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGGATGCCT 34684 Query 199529 TC 199530 || Sbjct 34685 TC 34686 >seq82 Length=64492 Score = 84.2 bits (92), Expect = 5e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 ||||||||| |||||| ||| || || | ||||| || || ||||| |||||||||| Sbjct 45250 CCTTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 45309 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | | ||||| |||||||| || ||||| || || ||||| ||| ||| | Sbjct 45310 TCAAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGT 45369 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| || || | | || || || | ||||| ||||| |||||||| || || || | Sbjct 45370 CGATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 45429 Query 199620 A 199620 | Sbjct 45430 A 45430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178908111294831