Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq151 132 5e-26
seq201 107 2e-18
seq82 87.8 2e-12
>seq151
Length=50061
Score = 132 bits (146), Expect = 5e-26
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| |||||||| | || |||||| ||| |
Sbjct 37033 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37092
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | || || |||| ||||| || || ||||| ||||||||
Sbjct 37093 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37152
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || ||||||| || ||||| || || || |||| ||||| |||| |||||||||
Sbjct 37153 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37212
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||| ||| |||| || || |||| || |||
Sbjct 37213 ATCCAAAAAGAATCGACTCTTCACCTGGTCCTTCGT 37248
Score = 104 bits (114), Expect = 2e-17
Identities = 141/193 (73%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326
|| ||||| ||||||||| |||| |||||| ||| ||| | | | | || | |||||
Sbjct 36829 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATG--TAAAGT 36886
Query 38327 AAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385
|| || | ||||| || || ||||| | || ||||| || ||||||| ||| ||||
Sbjct 36887 CCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCA 36946
Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445
||||||| || || | |||||| | | || |||||||| || || ||| | || |||
Sbjct 36947 AACAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGC 37006
Query 38446 ATTTGGTGCTGCG 38458
||||||| || ||
Sbjct 37007 ATTTGGTCCTTCG 37019
>seq201
Length=168916
Score = 107 bits (118), Expect = 2e-18
Identities = 141/195 (72%), Gaps = 3/195 (2%)
Strand=Plus/Plus
Query 133255 TGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCG 133314
|| ||||| || ||| || |||| || ||||||||||| ||||||||| || |||
Sbjct 78403 TGGACTTCAGCAGAGAACCGTTCGAGAAGGTTTTCGTTGACAATGCCGTCGGAAGCAGCG 78462
Query 133315 AAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC---CCAG 133371
||||| || || ||||| ||||| | || |||| || || | || | ||||
Sbjct 78463 AAAAATGCAAGGACGTGGGAAATGAAGTATCGTTCGTCATCATTGAGACGATTGTGCCAG 78522
Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTT 133431
||| | |||||||||||||||||| || || | ||||| || || |||||||| |
Sbjct 78523 TCGTGAAGGTCCTTGGACAGGTCCACTTCTTCAGCTGTCCAGAAGGATGCCTCGGCGCGT 78582
Query 133432 TTGTACATACTCCAC 133446
|||||| || |||||
Sbjct 78583 TTGTACGTATTCCAC 78597
>seq82
Length=64492
Score = 87.8 bits (96), Expect = 2e-12
Identities = 130/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| ||||||||| | || |||||| | |||| | |
Sbjct 45430 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACAATC 45371
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || || |||| || || || || || ||| | ||||||||||| |
Sbjct 45370 GACAACG-TCAAGTCCAAGATCCAAGATAAGGAAGGCATCCCCCCGGACCAACAGCGCTT 45312
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | ||| ||||| || || || || | || || || | || ||||||||||||||
Sbjct 45311 GATCTTCGCCGGCAAGCAACTTGAGGATGGCCGAACACTGAGTGATTACAACATCCAAAA 45252
Query 38432 GG 38433
||
Sbjct 45251 GG 45250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500167216821120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |