Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq151 132 5e-26 seq201 107 2e-18 seq82 87.8 2e-12 >seq151 Length=50061 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| |||||||| | || |||||| ||| | Sbjct 37033 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37092 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || || |||| ||||| || || ||||| |||||||| Sbjct 37093 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37152 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||||| || ||||| || || || |||| ||||| |||| ||||||||| Sbjct 37153 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37212 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||| |||| || || |||| || ||| Sbjct 37213 ATCCAAAAAGAATCGACTCTTCACCTGGTCCTTCGT 37248 Score = 104 bits (114), Expect = 2e-17 Identities = 141/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || ||||| ||||||||| |||| |||||| ||| ||| | | | | || | ||||| Sbjct 36829 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATG--TAAAGT 36886 Query 38327 AAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || || | ||||| || || ||||| | || ||||| || ||||||| ||| |||| Sbjct 36887 CCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCA 36946 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 ||||||| || || | |||||| | | || |||||||| || || ||| | || ||| Sbjct 36947 AACAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGC 37006 Query 38446 ATTTGGTGCTGCG 38458 ||||||| || || Sbjct 37007 ATTTGGTCCTTCG 37019 >seq201 Length=168916 Score = 107 bits (118), Expect = 2e-18 Identities = 141/195 (72%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 133255 TGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCG 133314 || ||||| || ||| || |||| || ||||||||||| ||||||||| || ||| Sbjct 78403 TGGACTTCAGCAGAGAACCGTTCGAGAAGGTTTTCGTTGACAATGCCGTCGGAAGCAGCG 78462 Query 133315 AAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC---CCAG 133371 ||||| || || ||||| ||||| | || |||| || || | || | |||| Sbjct 78463 AAAAATGCAAGGACGTGGGAAATGAAGTATCGTTCGTCATCATTGAGACGATTGTGCCAG 78522 Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTT 133431 ||| | |||||||||||||||||| || || | ||||| || || |||||||| | Sbjct 78523 TCGTGAAGGTCCTTGGACAGGTCCACTTCTTCAGCTGTCCAGAAGGATGCCTCGGCGCGT 78582 Query 133432 TTGTACATACTCCAC 133446 |||||| || ||||| Sbjct 78583 TTGTACGTATTCCAC 78597 >seq82 Length=64492 Score = 87.8 bits (96), Expect = 2e-12 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| | || |||||| | |||| | | Sbjct 45430 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACAATC 45371 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || || |||| || || || || || ||| | ||||||||||| | Sbjct 45370 GACAACG-TCAAGTCCAAGATCCAAGATAAGGAAGGCATCCCCCCGGACCAACAGCGCTT 45312 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| ||||| || || || || | || || || | || |||||||||||||| Sbjct 45311 GATCTTCGCCGGCAAGCAACTTGAGGATGGCCGAACACTGAGTGATTACAACATCCAAAA 45252 Query 38432 GG 38433 || Sbjct 45251 GG 45250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500167216821120