Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq151 96.9 1e-14 seq368 86.0 2e-11 >seq151 Length=50061 Score = 96.9 bits (106), Expect = 1e-14 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || ||||||| || || || || || || || |||||||| Sbjct 37261 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37320 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | ||| || |||||||| |||||||||||||| || || ||| Sbjct 37321 GACACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAA 37380 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| || || ||| | || |||||| | ||||| || ||||| | || ||||| Sbjct 37381 CAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGCGACTATAAC 37440 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 37441 ATCCAGAAGGA 37451 Score = 86.0 bits (94), Expect = 2e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 391134 AAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAA 391193 || ||||| || |||||||| ||||||||||||||||||||| | |||||| | || ||| Sbjct 36889 AAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAA 36948 Query 391194 CAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGA 391240 || || || ||||| | || ||| ||||| || ||| | || || Sbjct 36949 CAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGA 36995 >seq368 Length=133877 Score = 86.0 bits (94), Expect = 2e-11 Identities = 238/362 (66%), Gaps = 6/362 (2%) Strand=Plus/Minus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| ||||||||||| | |||||| | || ||||| || ||||| ||| Sbjct 80110 CTCCCGAAGAAATTTCGGCCATGGTTTTAGGCAAGATGAAGGAGGTCGCAGAGGCATACC 80051 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | || ||| || | ||||| | || ||||| || || ||||| || || Sbjct 80050 TGGGCGAGAAAGTCACCCACGCAGTGGTCACGGTTCCGGCATACTTCAACGACAACCAGA 79991 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | || || || ||||| || || ||||||||||| | |||||| ||| | | |||| Sbjct 79990 GACAGGCGACCAAAGACGCTGGTACCATTGCTGGTTTGACTGTTCTCCGAGTGGTCAATG 79931 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 |||| || || || || | || || || | ||| || || | || |||| | Sbjct 79930 AACCCACTGCCGCCGCAATCGCCTACGGTTT-GGACAAG--AAGGGAA---AAGAGAGCC 79877 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 | || | || | ||| ||||||| || || ||| || | || || ||||||| Sbjct 79876 AGATCATCGTCTACGATCTTGGTGGTGGTACATTCGATGTCTCACTCCTCTCGATTGAAG 79817 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601 |||| || || || || ||| ||| ||||||||||||||| || || || ||| ||| Sbjct 79816 ATGGTGTTTTCGAGGTCTTGGCGACCGCTGGTGATACTCATCTGGGTGGGGAGGATTTTG 79757 Query 451602 AT 451603 || Sbjct 79756 AT 79755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975695794694444