Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq292 208 9e-49 >seq292 Length=28646 Score = 208 bits (230), Expect = 9e-49 Identities = 883/1383 (64%), Gaps = 25/1383 (2%) Strand=Plus/Minus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| ||||||| || || | || |||||||| || || || || | | |||| Sbjct 11680 ACATGCTCATGCGTGTGGCAGTTGGCATCCATGGAGATGACATCGAGAAGGCGATAGAGA 11621 Query 111679 CATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTTCAACGCT 111737 | ||| || ||||||| | || |||| |||||| | ||||| || ||||| || Sbjct 11620 CCTACAACCTCATGTCCCA-GAAGTGCTTCACCCACGCCTCTCCAACTCTGTTCAATGCC 11562 Query 111738 GGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATC 111797 || || || ||| ||| ||||| || ||| | | | | || ||||| || Sbjct 11561 GGCACTCCGCAACCTCAATTGTCCTCATGCTTCTTGGTCGACATGAAAGAGGACAGCATT 11502 Query 111798 AATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATC 111857 | || ||||||| |||||||| ||||| ||||| ||| ||||| ||||| Sbjct 11501 GAGGGAATTTACGACACTCTCAAGACTTGTGCTATGATCTCCAAGACTGCTGGCGGTATT 11442 Query 111858 GGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAA 111917 || | || ||| | | || | || |||| || || || || Sbjct 11441 GGCCTCAACGCTCATTGCATTCGTGCTACTGGTTCCTATATTGCCGGGACCAACGGCACT 11382 Query 111918 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAA 111977 || ||||| | ||||| |||||||| || || ||| ||| || || ||||| |||| Sbjct 11381 TCCAATGGTCTCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTATGTGGACCAG 11322 Query 111978 GCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGAT 112031 | ||| ||||| | || | | || ||||||| |||||||||||||||||| Sbjct 11321 GGTGGCAATAAGCGTCCC---GGTGCCTTTGCCATCTATCTGGAGCCATGGCACGCGGAT 11265 Query 112032 ATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGAT 112091 || | || | || | || | ||||| || | || |||| || ||| || Sbjct 11264 GTCTTCGATTGGCTGAACCTGAGAAAGAACCACGGAAAGGAAGAGGTTCGCGCCCGTGAC 11205 Query 112092 CTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT 112151 | || | || || |||| ||| ||||| ||||||| | || ||| ||| | Sbjct 11204 TTGTTTTATGCACTTTGGACTCCGGATCTATTCATGAGACGTGTCGAGAAGAACCAAGAC 11145 Query 112152 TGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTT 112211 ||| |||| || ||||| | ||||||| || || | |||| | || ||||| || Sbjct 11144 TGGACTCTGTTCTGTCCTCATGAGGCACCGGGCCTTGCTGATGTCTATGGCGAGGAATTC 11085 Query 112212 GAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCC 112271 || |||||||| | |||| ||| |||| | || | | |||||| | || | Sbjct 11084 GATGCCCTCTATGAACAGTATGAGAAAGAGGGACGAGGTCGTCAGACGGT-CAAGGCCCA 11026 Query 112272 GATGT-GTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTA 112330 || || |||| | || || || | | || ||||||||||| || || ||||||||||| Sbjct 11025 GAAGTTGTGGTATGCGATCCTAGAAGCACAGACCGAGACTGGGACTCCTTATATGCTTTA 10966 Query 112331 CAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAA 112390 ||| || ||||| ||| | ||||| || || ||||| |||| ||| ||| ||||| Sbjct 10965 CAAGGATGCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGGACAATCCGGAGCTCCAA 10906 Query 112391 CCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC 112450 || || || ||||| | || | | | | |||||||| ||||| || || ||||| Sbjct 10905 TCTGTGCACGGAAATTGTCGAGTACAGTGCCCCAGATGAGATCGCTGTCTGCAATCTCGC 10846 Query 112451 ATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACT 112510 || | ||||| || | | || |||| || | || ||| | || || Sbjct 10845 CTCTCTGGCTCTTCCAACCTTCGTCGATCAAGCCCGAGGTGAATATGACTTTGGCCGTCT 10786 Query 112511 CCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTA 112570 || |||||||| || ||||| |||| | |||| | || |||| || | || Sbjct 10785 TCATGAAGTTACCCAAGTCGTCACTCGAAACTTGAACAAGATCATCGATATCAACTACTA 10726 Query 112571 CCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCA 112630 ||| || || | || || | ||||||| || ||||||| ||||| || Sbjct 10725 CCCTGTGCCCGAAGCCAGGAAGAGCAACTTCCGACACCGACCTGTTGGTCTTGGTGTTCA 10666 Query 112631 AGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGG 112689 ||||| || |||| ||| || ||||| || | | || || || || || Sbjct 10665 GGGTCTTGCAGATGCCTTCCTTGCTTTG-CGTCTTCCTTTCGACTCTCCAGAGGCCCGTC 10607 Query 112690 AAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGT 112749 || |||| | || || || || || || || || ||||| ||| | || Sbjct 10606 AACTCAACATCCAAATTTTCGAAACCATCTACCATGCAGCTCTGACTGCGTCATGCGAAC 10547 Query 112750 TGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGC 112809 | || ||| | ||||| ||||| |||| |||||| || | |||||||| | | Sbjct 10546 TCGCCAAGGAACAAGGTCCCTATGAGACCTATGAGGGCAGCCCGGTCTCACAAGGTATCC 10487 Query 112810 TTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA---CTA--CGACTGGGACGCTCT 112864 |||| | |||||||| |||| || | | ||||| ||| || ||||| || | Sbjct 10486 TTCAGTATGATATGT-GGAATGTTACTC----CTTCAGATCTATGGGATTGGGATGCATT 10432 Query 112865 CAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAAC 112924 || | || | | ||| |||| ||| ||| | | || || ||||| || Sbjct 10431 GAAAGCTGAGATTGCTAAACATGGTGTTCGCAACTCTCTCCTTGTTGCCCCTATGCCTAC 10372 Query 112925 AGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACAT 112984 || |||||| | ||||||||||| || || |||||||| || || |||||| | ||||| Sbjct 10371 TGCATCCACCTCTCAAATCTTGGGCAACAACGAATGCTTCGAGCCATACACGTCCAACAT 10312 Query 112985 CTA 112987 ||| Sbjct 10311 CTA 10309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620735470962960