Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq292 255 7e-63
seq56 86.0 7e-12
>seq292
Length=28646
Score = 255 bits (282), Expect = 7e-63
Identities = 903/1395 (65%), Gaps = 33/1395 (2%)
Strand=Plus/Plus
Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994
|||||||| | |||||| || || |||||||| || || ||||||||||| | ||||||
Sbjct 10309 TAGATGTTGGACGTGTATGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGAT 10368
Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGAT----GCG 106050
|| || ||||| || || | | ||| ||| |||| ||| | || || ||
Sbjct 10369 GCAGTAGGCATAGGGGCAACAAGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCT 10428
Query 106051 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATATCAAAT 106108
||| || ||||||| || | | || || || | || |||| |||||||| |
Sbjct 10429 TTCAATG----CATCCCAATCCCA-TAGATCTGAAGGAGTAACATTCC-ACATATCATAC 10482
Query 106109 TGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCA 106168
||||| | ||||| || || |||||| | |||||||||| |||||| | |
Sbjct 10483 TGAAGGATACCTTGTGAGACCGGGCTGCCCTCATAGGTCTCATAGGGACCTTGTTCCTTG 10542
Query 106169 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 106228
|| | ||| || ||| ||| | ||| || || |||||||| || || | ||
Sbjct 10543 GCGAGTTCGCATGACGCAGTCAGAGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTG 10602
Query 106229 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAG 106287
| | ||| || || || || | | || ||| | || || |||| || ||
Sbjct 10603 AGTTGACGGGCCTCTGGAGAGTCGAAAG-GAAGACGCAAAGCAAGGAAGGCATCTGCAAG 10661
Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAAC 106347
||| |||||||| | ||||| ||||| |||||| | || ||| | || ||
Sbjct 10662 ACCCTGAACACCAAGACCAACAGGTCGGTGTCGGAAGTTGCTCTTCCTGGCTTCGGGCAC 10721
Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407
|| || | || | || |||| ||| | ||| || || | | || | |||
Sbjct 10722 AGGGTAGTAGTTGATATCGATGATCTTGTTCAAGTTTCGAGTGACGACTTGGGTAACTTC 10781
Query 106408 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCT--CTTCATTGACATACTTTGGAAGGGCG 106465
|||||| || | ||| | | | || ||| || ||| | ||||||| ||
Sbjct 10782 ATGAAGACGGCCAAAGTCATA--TTCACCTCGGGCTTGATCGACGAAGGTTGGAAGAGCC 10839
Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525
| || || | |||||| ||||| ||||||| | ||||||| | |||||| ||
Sbjct 10840 AGAGAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTG 10899
Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585
|||| ||||| ||| || ||||||| ||||| ||||| ||||| |||||||| |||
Sbjct 10900 CACAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCA 10959
Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC 106645
|||||||| ||||| || || ||||| ||||| ||||||| | || || || | ||||
Sbjct 10960 TCCTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTCTGTGCTTCTAGGATCGCATACCAC 11019
Query 106646 A-CATCGGCGGCTGGTACAA-TGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGA 106703
| | || | | || | | || || | |||||||| ||| |||| | ||||
Sbjct 11020 AACTTCTGGGCCTTGACCGTCTGACGAC--CTCGTCCCTCTTTCTCATACTGTTCATAGA 11077
Query 106704 GGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAA 106763
|||| || || ||||| || | || | || || ||||||| | |||||||| |
Sbjct 11078 GGGCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACA 11137
Query 106764 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 106823
||| ||| | || ||| || || ||||||| || || ||| |||| || |
Sbjct 11138 GAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCAT 11197
Query 106824 AAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACT 106883
|||| | || | ||| ||||||| | || ||||| || | | || | |
Sbjct 11198 AAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAAT 11257
Query 106884 CCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC---- 106939
| | || |||||||||||||||||| ||||||| || | | || |||||
Sbjct 11258 CGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACC---GGGACGCTTAT 11314
Query 106940 --CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 106997
||| | || | ||||| || || ||| ||| || || |||||||| ||||| | ||
Sbjct 11315 TGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGAC 11374
Query 106998 CATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGT 107057
||| || || || ||||| |||| || | | || | | ||| ||
Sbjct 11375 CATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCAATGAGCGT 11434
Query 107058 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 107117
| |||||||| ||||| ||| ||||| ||||| | | ||||| | || |
Sbjct 11435 TGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAAA 11494
Query 107118 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 107177
| || | || |||||| || || ||| | |||||| ||||| || ||| |
Sbjct 11495 TTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTGCG 11554
Query 107178 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGGGACATCTTG 107236
| || || |||||||| || ||||| | ||||| |||| || | |||||||| |
Sbjct 11555 GAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTC-TGGGACATGAGG 11613
Query 107237 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATA 107296
| ||| ||||| | | || ||||| || || |||||||| | |||||||||||
Sbjct 11614 TTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCCACACGCATG 11673
Query 107297 AACATGTATTGGGGT 107311
| ||||| ||| |||
Sbjct 11674 AGCATGTGTTGCGGT 11688
>seq56
Length=70628
Score = 86.0 bits (94), Expect = 7e-12
Identities = 195/288 (68%), Gaps = 8/288 (3%)
Strand=Plus/Minus
Query 169185 CCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAGCGA 169244
|| || |||||| ||||||| ||| ||||||||| ||||| | | |||||||||
Sbjct 37408 CCTTTAATGTGACTTCCATCATGATCCTGATCTGTCATGATCATCAAGTGTCCATAGCGA 37349
Query 169245 AGTTCAGAAACATCTTGGTAGTCTTTTCCTTGT--TGAAGACCCAAGATCTTCTTGA-GA 169301
|| | ||| |||| |||| ||||| || ||||| | || || |||| |
Sbjct 37348 AGGCCGTGGGTATCGGTGTAGACTTT--CTTGTGCTGGAGACCGAGGAAGTTTTTGATGT 37291
Query 169302 TCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACATTCTTACA 169360
|| |||| ||| ||| || || ||| | ||||| ||||| ||||||||| |
Sbjct 37290 TC--TGAATCTCGGCGTTCTTTGAGATCTGATCAACTGATGCGTCTCGGACATTCAAAAG 37233
Query 169361 CTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGACCCGCGAC 169420
|| || || || |||||||||||| | ||| | |||||||| || | || || |
Sbjct 37232 TTTACCGCGCAGGGGAAAGACGCCAAACAAATCGGGACCAACGACCGATCGTCCGGCCAT 37173
Query 169421 CGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTT 169468
||||| ||| || ||||| ||||| || | || | ||| || ||
Sbjct 37172 TGCAAGACCTTTGGCAGAATCTCCCTCAGTCAGTATCAAGGTGCATTT 37125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589974214339320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |