Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq292 255 7e-63 seq56 86.0 7e-12 >seq292 Length=28646 Score = 255 bits (282), Expect = 7e-63 Identities = 903/1395 (65%), Gaps = 33/1395 (2%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||| | |||||| || || |||||||| || || ||||||||||| | |||||| Sbjct 10309 TAGATGTTGGACGTGTATGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGAT 10368 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGAT----GCG 106050 || || ||||| || || | | ||| ||| |||| ||| | || || || Sbjct 10369 GCAGTAGGCATAGGGGCAACAAGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCT 10428 Query 106051 TTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATATCAAAT 106108 ||| || ||||||| || | | || || || | || |||| |||||||| | Sbjct 10429 TTCAATG----CATCCCAATCCCA-TAGATCTGAAGGAGTAACATTCC-ACATATCATAC 10482 Query 106109 TGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCA 106168 ||||| | ||||| || || |||||| | |||||||||| |||||| | | Sbjct 10483 TGAAGGATACCTTGTGAGACCGGGCTGCCCTCATAGGTCTCATAGGGACCTTGTTCCTTG 10542 Query 106169 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 106228 || | ||| || ||| ||| | ||| || || |||||||| || || | || Sbjct 10543 GCGAGTTCGCATGACGCAGTCAGAGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTG 10602 Query 106229 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAG 106287 | | ||| || || || || | | || ||| | || || |||| || || Sbjct 10603 AGTTGACGGGCCTCTGGAGAGTCGAAAG-GAAGACGCAAAGCAAGGAAGGCATCTGCAAG 10661 Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAAC 106347 ||| |||||||| | ||||| ||||| |||||| | || ||| | || || Sbjct 10662 ACCCTGAACACCAAGACCAACAGGTCGGTGTCGGAAGTTGCTCTTCCTGGCTTCGGGCAC 10721 Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407 || || | || | || |||| ||| | ||| || || | | || | ||| Sbjct 10722 AGGGTAGTAGTTGATATCGATGATCTTGTTCAAGTTTCGAGTGACGACTTGGGTAACTTC 10781 Query 106408 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCT--CTTCATTGACATACTTTGGAAGGGCG 106465 |||||| || | ||| | | | || ||| || ||| | ||||||| || Sbjct 10782 ATGAAGACGGCCAAAGTCATA--TTCACCTCGGGCTTGATCGACGAAGGTTGGAAGAGCC 10839 Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525 | || || | |||||| ||||| ||||||| | ||||||| | |||||| || Sbjct 10840 AGAGAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTG 10899 Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585 |||| ||||| ||| || ||||||| ||||| ||||| ||||| |||||||| ||| Sbjct 10900 CACAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCA 10959 Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC 106645 |||||||| ||||| || || ||||| ||||| ||||||| | || || || | |||| Sbjct 10960 TCCTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTCTGTGCTTCTAGGATCGCATACCAC 11019 Query 106646 A-CATCGGCGGCTGGTACAA-TGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGA 106703 | | || | | || | | || || | |||||||| ||| |||| | |||| Sbjct 11020 AACTTCTGGGCCTTGACCGTCTGACGAC--CTCGTCCCTCTTTCTCATACTGTTCATAGA 11077 Query 106704 GGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAA 106763 |||| || || ||||| || | || | || || ||||||| | |||||||| | Sbjct 11078 GGGCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACA 11137 Query 106764 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 106823 ||| ||| | || ||| || || ||||||| || || ||| |||| || | Sbjct 11138 GAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCAT 11197 Query 106824 AAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACT 106883 |||| | || | ||| ||||||| | || ||||| || | | || | | Sbjct 11198 AAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAAT 11257 Query 106884 CCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC---- 106939 | | || |||||||||||||||||| ||||||| || | | || ||||| Sbjct 11258 CGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACC---GGGACGCTTAT 11314 Query 106940 --CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 106997 ||| | || | ||||| || || ||| ||| || || |||||||| ||||| | || Sbjct 11315 TGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGAC 11374 Query 106998 CATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGT 107057 ||| || || || ||||| |||| || | | || | | ||| || Sbjct 11375 CATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCAATGAGCGT 11434 Query 107058 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 107117 | |||||||| ||||| ||| ||||| ||||| | | ||||| | || | Sbjct 11435 TGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAAA 11494 Query 107118 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 107177 | || | || |||||| || || ||| | |||||| ||||| || ||| | Sbjct 11495 TTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTGCG 11554 Query 107178 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTGGGACATCTTG 107236 | || || |||||||| || ||||| | ||||| |||| || | |||||||| | Sbjct 11555 GAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTC-TGGGACATGAGG 11613 Query 107237 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATA 107296 | ||| ||||| | | || ||||| || || |||||||| | ||||||||||| Sbjct 11614 TTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCCACACGCATG 11673 Query 107297 AACATGTATTGGGGT 107311 | ||||| ||| ||| Sbjct 11674 AGCATGTGTTGCGGT 11688 >seq56 Length=70628 Score = 86.0 bits (94), Expect = 7e-12 Identities = 195/288 (68%), Gaps = 8/288 (3%) Strand=Plus/Minus Query 169185 CCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAGCGA 169244 || || |||||| ||||||| ||| ||||||||| ||||| | | ||||||||| Sbjct 37408 CCTTTAATGTGACTTCCATCATGATCCTGATCTGTCATGATCATCAAGTGTCCATAGCGA 37349 Query 169245 AGTTCAGAAACATCTTGGTAGTCTTTTCCTTGT--TGAAGACCCAAGATCTTCTTGA-GA 169301 || | ||| |||| |||| ||||| || ||||| | || || |||| | Sbjct 37348 AGGCCGTGGGTATCGGTGTAGACTTT--CTTGTGCTGGAGACCGAGGAAGTTTTTGATGT 37291 Query 169302 TCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACATTCTTACA 169360 || |||| ||| ||| || || ||| | ||||| ||||| ||||||||| | Sbjct 37290 TC--TGAATCTCGGCGTTCTTTGAGATCTGATCAACTGATGCGTCTCGGACATTCAAAAG 37233 Query 169361 CTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGACCCGCGAC 169420 || || || || |||||||||||| | ||| | |||||||| || | || || | Sbjct 37232 TTTACCGCGCAGGGGAAAGACGCCAAACAAATCGGGACCAACGACCGATCGTCCGGCCAT 37173 Query 169421 CGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTT 169468 ||||| ||| || ||||| ||||| || | || | ||| || || Sbjct 37172 TGCAAGACCTTTGGCAGAATCTCCCTCAGTCAGTATCAAGGTGCATTT 37125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589974214339320