Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq741 114 2e-20 >seq741 Length=107213 Score = 114 bits (126), Expect = 2e-20 Identities = 174/248 (70%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||| | |||||| ||||| ||||||| || || || || || || |||||||| | Sbjct 29980 CAACGTTTTGGTGTTCCTTTGGGATATGGCGGACCCCACGCCGCCTTCTTTGCCTGCAAT 30039 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || ||| | || ||||||| ||||| | |||| || ||| ||| | ||| Sbjct 30040 GAAAAGCACAAACGAAAGATCCCTGGTCGTCTTGTCGGCGTGTCCAAGGATCGTCTCGGT 30099 Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622 ||| ||| || |||| | |||||| | || ||||||||||||||||| ||||| Sbjct 30100 AATCGAGCTCTTCGACTAGCCTTGCAGACTCGCGAACAGCATATCAGAAGAGAGAAAGCG 30159 Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCA 158682 ||||| || ||||| || || ||||| || || || || ||| || || ||||| | Sbjct 30160 ACCAGCAATATCTGTACCGCTCAAGCGCTCCTTGCAAACATGAGTGCATTTTATGCCATA 30219 Query 158683 TATCATGG 158690 |||||||| Sbjct 30220 TATCATGG 30227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588044635878480