Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq292 170 4e-37
seq201 86.0 1e-11
>seq292
Length=28646
Score = 170 bits (188), Expect = 4e-37
Identities = 700/1087 (64%), Gaps = 34/1087 (3%)
Strand=Plus/Plus
Query 213114 ACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAG 213173
|| |||||||| ||| |||| | ||| |||| || |||||||||| || |
Sbjct 10465 ACATTCCACATATCATACTGAAGGATACCTTGTGAGACCGGGCTGCCCTCATAGGTCTCA 10524
Query 213174 TAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTT 213233
||||| || || |||||||| || ||||| ||||| ||| || || | ||||||||||
Sbjct 10525 TAGGGACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTCAGAGCTGCATGGTAGATGGTT 10584
Query 213234 TCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGT 213293
|| || || | ||||||| | ||||||||| || ||| || | ||
Sbjct 10585 TCGAAAATTTGGATGTTGAGTTGACGGGCCTCTGGAGAGTCGAAAGGAAGACGCAAAGCA 10644
Query 213294 TGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGAC 213353
|||| |||| || || ||||| || || | || | |||| ||||| | ||| |
Sbjct 10645 AGGAAGGCATCTGCAAGACCCTGAACACCAAGACCAACAGGTCGGTGTCGGAAGTTGCTC 10704
Query 213354 TTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTG 213413
|| | || || ||||| ||||| |||||||||||||| | ||| || |||
Sbjct 10705 TTCCTGGCTTCGGGCACAGGGTAGTAGTTGATATCGATGATCTTGTTCAAGTTTCGAGTG 10764
Query 213414 GCCACTTTGGTGA---CATG-----GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGT 213465
| |||| ||| | |||| ||||| | || | ||| ||| | | | |
Sbjct 10765 ACGACTTGGGTAACTTCATGAAGACGGCCA--AAGTCAT-ATT---CACCT--CGGGCTT 10816
Query 213466 CCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGT 213525
| || || || || || | ||| || ||||| || || | ||| | | |
Sbjct 10817 GATCGACGAAGGTTGGAAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCATCTGGGG 10876
Query 213526 CTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGT 213585
| ||||||| | || || |||||||| ||| || ||||| || |||||||||| |
Sbjct 10877 CACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCT 10936
Query 213586 GGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCT 213645
|||| ||| |||| | ||||||||| ||||| || || | ||| ||||| ||
Sbjct 10937 GGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTCT 10996
Query 213646 GGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGAC-AGCTCCG 213704
| | | || ||| ||| | | | |||||||| ||| ||||| | |||
Sbjct 10997 GTGCTTCTAGGATCGCATACCACAACTTCTGGGCCTTGA----CCGTCTGACGACCTCGT 11052
Query 213705 GGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGT 213764
| ||| |||||||| ||||| | | |||||| | ||| |||| | ||
Sbjct 11053 CCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGG 11112
Query 213765 CCCGG-ACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACTC-TCTGC 213821
||||| | ||| ||||| | || ||||||| | || |||| ||| | ||| |
Sbjct 11113 CCCGGTGCCTCATG-AGGACAGAACAGAGTCCAGTCTTGGTTCTTCTC-GACACGTCT-C 11169
Query 213822 ATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACT 213881
||||| || ||||| ||| || || |||| ||| | || | ||| ||| |
Sbjct 11170 ATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTT 11229
Query 213882 CCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAG 213941
|| ||| || | ||| | || | || |||| ||||||||||| ||||||| |||
Sbjct 11230 CCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAG 11289
Query 213942 ATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTG 213998
||||||||||| || | || | ||||| ||||||||||| | ||| |||||
Sbjct 11290 ATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTG 11349
Query 213999 AAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAG 214058
|||| || || | ||| | || || ||||| |||||||| || || ||||| ||
Sbjct 11350 AAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAA 11409
Query 214059 CCGGAGGCCCTCAGG--TTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCA 214116
|| | || | | | || | | ||| || || || || || |||||||||||
Sbjct 11410 CCAGTAGCACGAATGCAATGAGC--GTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCA 11467
Query 214117 TGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCA 214176
| || || | | | ||| || || || | |||||||| ||| | | || | ||
Sbjct 11468 TAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCA 11527
Query 214177 AGAAGCA 214183
|||||||
Sbjct 11528 AGAAGCA 11534
>seq201
Length=168916
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAAC 48271
|| |||||||| || | ||||| ||||| |||||||| ||||| || || || | |||
Sbjct 78070 TTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAAATGCCTTCGACGGCAGAGAAT 78129
Query 48272 GCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCT 48331
||| ||| | | |||| || | ||||||||||||||| | ||||||||
Sbjct 78130 GCGACGAGGCGTTGGGCGAAGCTAGACTCCTTGTCTGAGATCCACTTCAAGGCCCAGTCA 78189
Query 48332 GCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366
|||||||| |||||| || || || || |||||
Sbjct 78190 GCCTTCTTGCGGATGCAGGGGATAGTATCAATGGC 78224
Score = 84.2 bits (92), Expect = 4e-11
Identities = 121/170 (71%), Gaps = 3/170 (2%)
Strand=Plus/Plus
Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550
|| ||||| | ||||| | || || || || || ||||| || || || ||||||||
Sbjct 78403 TGGACTTCAGCAGAGAACCGTTCGAGAAGGTTTTCGTTGACAATGCCGTCGGAAGCAGCG 78462
Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAG 48607
|| || |||||||| || || ||| | || |||| | ||||| ||| ||||
Sbjct 78463 AAAAATGCAAGGACGTGGGAAATGAAGTATCGTTCGTCATCATTGAGACGATTGTGCCAG 78522
Query 48608 CCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
| || | ||| ||| ||||||||||||||| | ||||||||||| ||
Sbjct 78523 TCGTGAAGGTCCTTGGACAGGTCCACTTCTTCAGCTGTCCAGAAGGATGC 78572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931522401765120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |