Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq292 170 4e-37 seq201 86.0 1e-11 >seq292 Length=28646 Score = 170 bits (188), Expect = 4e-37 Identities = 700/1087 (64%), Gaps = 34/1087 (3%) Strand=Plus/Plus Query 213114 ACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAG 213173 || |||||||| ||| |||| | ||| |||| || |||||||||| || | Sbjct 10465 ACATTCCACATATCATACTGAAGGATACCTTGTGAGACCGGGCTGCCCTCATAGGTCTCA 10524 Query 213174 TAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTT 213233 ||||| || || |||||||| || ||||| ||||| ||| || || | |||||||||| Sbjct 10525 TAGGGACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTCAGAGCTGCATGGTAGATGGTT 10584 Query 213234 TCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGT 213293 || || || | ||||||| | ||||||||| || ||| || | || Sbjct 10585 TCGAAAATTTGGATGTTGAGTTGACGGGCCTCTGGAGAGTCGAAAGGAAGACGCAAAGCA 10644 Query 213294 TGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGAC 213353 |||| |||| || || ||||| || || | || | |||| ||||| | ||| | Sbjct 10645 AGGAAGGCATCTGCAAGACCCTGAACACCAAGACCAACAGGTCGGTGTCGGAAGTTGCTC 10704 Query 213354 TTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTG 213413 || | || || ||||| ||||| |||||||||||||| | ||| || ||| Sbjct 10705 TTCCTGGCTTCGGGCACAGGGTAGTAGTTGATATCGATGATCTTGTTCAAGTTTCGAGTG 10764 Query 213414 GCCACTTTGGTGA---CATG-----GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGT 213465 | |||| ||| | |||| ||||| | || | ||| ||| | | | | Sbjct 10765 ACGACTTGGGTAACTTCATGAAGACGGCCA--AAGTCAT-ATT---CACCT--CGGGCTT 10816 Query 213466 CCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGT 213525 | || || || || || | ||| || ||||| || || | ||| | | | Sbjct 10817 GATCGACGAAGGTTGGAAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCATCTGGGG 10876 Query 213526 CTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGT 213585 | ||||||| | || || |||||||| ||| || ||||| || |||||||||| | Sbjct 10877 CACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCT 10936 Query 213586 GGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCT 213645 |||| ||| |||| | ||||||||| ||||| || || | ||| ||||| || Sbjct 10937 GGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTCT 10996 Query 213646 GGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGAC-AGCTCCG 213704 | | | || ||| ||| | | | |||||||| ||| ||||| | ||| Sbjct 10997 GTGCTTCTAGGATCGCATACCACAACTTCTGGGCCTTGA----CCGTCTGACGACCTCGT 11052 Query 213705 GGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGT 213764 | ||| |||||||| ||||| | | |||||| | ||| |||| | || Sbjct 11053 CCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGG 11112 Query 213765 CCCGG-ACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACTC-TCTGC 213821 ||||| | ||| ||||| | || ||||||| | || |||| ||| | ||| | Sbjct 11113 CCCGGTGCCTCATG-AGGACAGAACAGAGTCCAGTCTTGGTTCTTCTC-GACACGTCT-C 11169 Query 213822 ATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACT 213881 ||||| || ||||| ||| || || |||| ||| | || | ||| ||| | Sbjct 11170 ATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTT 11229 Query 213882 CCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAG 213941 || ||| || | ||| | || | || |||| ||||||||||| ||||||| ||| Sbjct 11230 CCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAG 11289 Query 213942 ATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTG 213998 ||||||||||| || | || | ||||| ||||||||||| | ||| ||||| Sbjct 11290 ATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTG 11349 Query 213999 AAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAG 214058 |||| || || | ||| | || || ||||| |||||||| || || ||||| || Sbjct 11350 AAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAA 11409 Query 214059 CCGGAGGCCCTCAGG--TTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCA 214116 || | || | | | || | | ||| || || || || || ||||||||||| Sbjct 11410 CCAGTAGCACGAATGCAATGAGC--GTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCA 11467 Query 214117 TGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCA 214176 | || || | | | ||| || || || | |||||||| ||| | | || | || Sbjct 11468 TAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCA 11527 Query 214177 AGAAGCA 214183 ||||||| Sbjct 11528 AGAAGCA 11534 >seq201 Length=168916 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAAC 48271 || |||||||| || | ||||| ||||| |||||||| ||||| || || || | ||| Sbjct 78070 TTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAAATGCCTTCGACGGCAGAGAAT 78129 Query 48272 GCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCT 48331 ||| ||| | | |||| || | ||||||||||||||| | |||||||| Sbjct 78130 GCGACGAGGCGTTGGGCGAAGCTAGACTCCTTGTCTGAGATCCACTTCAAGGCCCAGTCA 78189 Query 48332 GCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 |||||||| |||||| || || || || ||||| Sbjct 78190 GCCTTCTTGCGGATGCAGGGGATAGTATCAATGGC 78224 Score = 84.2 bits (92), Expect = 4e-11 Identities = 121/170 (71%), Gaps = 3/170 (2%) Strand=Plus/Plus Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || ||||| | ||||| | || || || || || ||||| || || || |||||||| Sbjct 78403 TGGACTTCAGCAGAGAACCGTTCGAGAAGGTTTTCGTTGACAATGCCGTCGGAAGCAGCG 78462 Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAG 48607 || || |||||||| || || ||| | || |||| | ||||| ||| |||| Sbjct 78463 AAAAATGCAAGGACGTGGGAAATGAAGTATCGTTCGTCATCATTGAGACGATTGTGCCAG 78522 Query 48608 CCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 | || | ||| ||| ||||||||||||||| | ||||||||||| || Sbjct 78523 TCGTGAAGGTCCTTGGACAGGTCCACTTCTTCAGCTGTCCAGAAGGATGC 78572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931522401765120