Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq292 161 2e-34 >seq292 Length=28646 Score = 161 bits (178), Expect = 2e-34 Identities = 451/679 (66%), Gaps = 16/679 (2%) Strand=Plus/Plus Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCC-TCTGCATGAAGAGGTCCGGGAT 222057 ||||| | |||| |||||| | ||| | | ||| | ||| |||||| || ||||| | Sbjct 11128 GGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCT-CATGAATAGATCCGGAGT 11186 Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAG 222117 ||| || || | ||| | || | || || ||| ||| |||| ||| || ||||| Sbjct 11187 CCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAG 11246 Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGG 222177 | || | || || | || |||||||| ||||||||||||| ||| | || ||||| Sbjct 11247 GTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGG 11306 Query 222178 TCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCG 222236 ||||| ||||||||||| |||| ||| ||| | |||||||| ||||| | | Sbjct 11307 ACGCTTATTGCCACCCTGGTCCA-CATAACGGGCAGTGTTGTTGAAGACACGAAGCATGG 11365 Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT 222296 | | || || ||||| |||||||| || ||| || | ||| || | | | Sbjct 11366 GAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGC 11425 Query 222297 TACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAG 222356 | || | ||| ||||| || || || |||||||| || || ||||||||| Sbjct 11426 AATGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAG 11485 Query 222357 TGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT 222416 |||| || ||||| || |||||| || | || | || || || || |||| | Sbjct 11486 TGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATT 11545 Query 222417 GAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAG 222476 ||| || | | | ||| || ||||| || ||| |||||| || ||| | | | Sbjct 11546 GAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGG 11605 Query 222477 ACATCAGATCGTACGTCTCTA-CGACTCTGGCGATGTTGTCCCCGTGAAT-CTGCATGGC 222534 |||| || | ||| ||||||| || || | |||||| || || || || | || | Sbjct 11606 ACATGAGGTTGTAGGTCTCTATCGCCT-TCTCGATGTCATCTCCATGGATGCCAACTGCC 11664 Query 222535 GCATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTG-GAGC---TGGAGAGCA 222590 || | |||| ||||| || || ||||| || | |||| || | ||||| Sbjct 11665 ACA-CGCATGAGCATGTGTTGCGGTCTCTC----GGCCACTTGTTTGCCAATCTTGAGCA 11719 Query 222591 GGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAA 222650 | || ||| |||||| ||||||||| || ||||| | | || ||||||| | ||| || Sbjct 11720 GATATGATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCGTAAA 11779 Query 222651 CCACGGCGGCGTCCAGCTC 222669 | | ||| | || |||||| Sbjct 11780 CGATGGCCGAGTTCAGCTC 11798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928834431769920