Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq115 129 7e-24
seq292 93.3 5e-13
seq201 89.7 6e-12
>seq115
Length=57476
Score = 129 bits (142), Expect = 7e-24
Identities = 95/111 (86%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| ||||||||| | || || ||| ||||||||||| | || |||||| | || ||||||
Sbjct 30865 GCTGCCAACTACTTGGATATTAAGGCTCTGCTCGATGTCGGTTGCAAGACCGTCGCCAAC 30924
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||||||||||||||| || |||||||||||||||||||| |||||| ||
Sbjct 30925 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 30975
>seq292
Length=28646
Score = 93.3 bits (102), Expect = 5e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 1628464 GTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTG 1628523
||||| ||||| ||||| | ||| || || || ||| ||||| |||||||||||| |
Sbjct 11185 GTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTC 11244
Query 1628524 AGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 1628582
|||| ||||| |||| | || |||||||| |||||||| ||| ||||||||| ||
Sbjct 11245 AGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACC 11303
>seq201
Length=168916
Score = 89.7 bits (98), Expect = 6e-12
Identities = 160/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758
||| || || || ||| |||||| ||||| ||||| ||| | | ||||| |||||
Sbjct 77654 GTAATCACCGACACGCTTCTCGAAGAAGTTTGTCTTTCCCGCCAATGAGATGTTGTCCAT 77713
Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818
| ||| || || | | ||||||| ||| | | |||||| | ||| || ||
Sbjct 77714 AAAGCTGAAAGGATTCTGGGCATTGTAGTACTTCTTGTTTCCGAGGGCAAGGAGAAGACG 77773
Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878
|||||| || ||||| || || || ||| || |||||||||||| | || || ||
Sbjct 77774 GTCGGCAACGAACTCAATATATTGTTGCATCAGTTTGGCGTTCATGCCAAGCAGAGCGAC 77833
Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932
|||| | || ||| ||| || |||||||| | || |||||| ||||||
Sbjct 77834 AGGCAAAGCATCTGTCAAAAATTCCTTCTCGATGACAACAGCCTCGGTGATGAT 77887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107065916238081
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |