Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq115 129 7e-24 seq292 93.3 5e-13 seq201 89.7 6e-12 >seq115 Length=57476 Score = 129 bits (142), Expect = 7e-24 Identities = 95/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||| | || || ||| ||||||||||| | || |||||| | || |||||| Sbjct 30865 GCTGCCAACTACTTGGATATTAAGGCTCTGCTCGATGTCGGTTGCAAGACCGTCGCCAAC 30924 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||||| || |||||||||||||||||||| |||||| || Sbjct 30925 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 30975 >seq292 Length=28646 Score = 93.3 bits (102), Expect = 5e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1628464 GTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTG 1628523 ||||| ||||| ||||| | ||| || || || ||| ||||| |||||||||||| | Sbjct 11185 GTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTC 11244 Query 1628524 AGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 1628582 |||| ||||| |||| | || |||||||| |||||||| ||| ||||||||| || Sbjct 11245 AGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACC 11303 >seq201 Length=168916 Score = 89.7 bits (98), Expect = 6e-12 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| || || || ||| |||||| ||||| ||||| ||| | | ||||| ||||| Sbjct 77654 GTAATCACCGACACGCTTCTCGAAGAAGTTTGTCTTTCCCGCCAATGAGATGTTGTCCAT 77713 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| || || | | ||||||| ||| | | |||||| | ||| || || Sbjct 77714 AAAGCTGAAAGGATTCTGGGCATTGTAGTACTTCTTGTTTCCGAGGGCAAGGAGAAGACG 77773 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 |||||| || ||||| || || || ||| || |||||||||||| | || || || Sbjct 77774 GTCGGCAACGAACTCAATATATTGTTGCATCAGTTTGGCGTTCATGCCAAGCAGAGCGAC 77833 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932 |||| | || ||| ||| || |||||||| | || |||||| |||||| Sbjct 77834 AGGCAAAGCATCTGTCAAAAATTCCTTCTCGATGACAACAGCCTCGGTGATGAT 77887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107065916238081