Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq115 114 2e-19
seq292 113 7e-19
seq201 105 1e-16
seq368 89.7 8e-12
>seq115
Length=57476
Score = 114 bits (126), Expect = 2e-19
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| ||||||||| | || || ||| | || |||||| | || ||||||||||| ||||||
Sbjct 30865 GCTGCCAACTACTTGGATATTAAGGCTCTGCTCGATGTCGGTTGCAAGACCGTCGCCAAC 30924
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757
| |||||||||||||| || ||||| |||||||||||||| |||||| ||
Sbjct 30925 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 30975
>seq292
Length=28646
Score = 113 bits (124), Expect = 7e-19
Identities = 205/300 (68%), Gaps = 0/300 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| ||||| || || |||| ||| ||||| || |||||||| | || || |||||
Sbjct 11322 CTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTGGA 11381
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||||||| || || | |||| || | || || | || ||| | |||
Sbjct 11382 AGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCAATGAGCGTTGAGGCC 11441
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| ||||| || | ||||||||| | || || | || || || ||||| || |||||
Sbjct 11442 AATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTC 11501
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| | |||||||| | || ||||| || || ||| || ||| |||||
Sbjct 11502 AATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCC 11561
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
||||||||| || || || | || ||| | ||| ||||||||| | ||||||
Sbjct 11562 GGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGT 11621
Score = 89.7 bits (98), Expect = 8e-12
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 2071876 GTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTC 2071935
||||| || | ||||| | || || || || ||| ||||| |||||||||||| ||
Sbjct 11185 GTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTC 11244
Query 2071936 AGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 2071994
|||| ||||| |||| || || |||||||| |||||||| ||| ||||||||| ||
Sbjct 11245 AGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACC 11303
>seq201
Length=168916
Score = 105 bits (116), Expect = 1e-16
Identities = 180/259 (69%), Gaps = 9/259 (3%)
Strand=Plus/Plus
Query 794399 TCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458
|||| ||||| ||||||| ||| ||| ||||| || ||||| |||||||| | |
Sbjct 78068 TCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAAATGCCTTCGACGGCAGAGA 78127
Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTT---GATCCACTTCATCG 794515
| ||||||| || | ||| || | || | || |||| ||||||||||| |
Sbjct 78128 ATGCGACGAGGCGTTGGGCGAAGCT----AGAC--TCCTTGTCTGAGATCCACTTCAAGG 78181
Query 794516 CCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCT 794575
|||| || ||||| || | | |||| | || || |||||| |||||| | | ||
Sbjct 78182 CCCAGTCAGCCTTCTTGCGGATGCAGGGGATAGTATCAATGGCGTCAAAGAGATAGGACT 78241
Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635
| | || || |||| ||||||||||||||| | ||| |||||||||| ||||
Sbjct 78242 TTTGTTTGGGATCTTTGATGTAGGTGTCGATGAGCAAGCTGTACATCTCTGAGTGAATGT 78301
Query 794636 TTTCGATGGCGATCTGGAA 794654
||||||| || ||||||
Sbjct 78302 TTTCGATCATGACCTGGAA 78320
>seq368
Length=133877
Score = 89.7 bits (98), Expect = 8e-12
Identities = 100/130 (77%), Gaps = 8/130 (6%)
Strand=Plus/Minus
Query 2233090 GGTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCGTCAGACGAGGC 2233149
||| || |||||||| |||||||||||||| || || || |||||| | || | ||| |
Sbjct 65698 GGTTGCATTTCCCACGGAGACCGTCTATGGTCTAGGTGCAGACGCGAC--CA-ATGAGCC 65642
Query 2233150 CGTA----CAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGC 2233205
| | ||| ||||||||| |||||| ||||||||| |||||||| ||||||| |
Sbjct 65641 TGCAATCTCAG-GCATCTTTGCCGCCAAAGGCCGACCGAGTGACAACCCGCTCATCGTCC 65583
Query 2233206 ACGTGGCCTC 2233215
|||| || ||
Sbjct 65582 ACGTTGCATC 65573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916151407517027
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |