Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq115 114 2e-19 seq292 113 7e-19 seq201 105 1e-16 seq368 89.7 8e-12 >seq115 Length=57476 Score = 114 bits (126), Expect = 2e-19 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||| | || || ||| | || |||||| | || ||||||||||| |||||| Sbjct 30865 GCTGCCAACTACTTGGATATTAAGGCTCTGCTCGATGTCGGTTGCAAGACCGTCGCCAAC 30924 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||||| || ||||| |||||||||||||| |||||| || Sbjct 30925 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAG 30975 >seq292 Length=28646 Score = 113 bits (124), Expect = 7e-19 Identities = 205/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| ||||| || || |||| ||| ||||| || |||||||| | || || ||||| Sbjct 11322 CTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTGGA 11381 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||| || || | |||| || | || || | || ||| | ||| Sbjct 11382 AGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCAATGAGCGTTGAGGCC 11441 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || ||||| || | ||||||||| | || || | || || || ||||| || ||||| Sbjct 11442 AATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTC 11501 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| | |||||||| | || ||||| || || ||| || ||| ||||| Sbjct 11502 AATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCC 11561 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||||||||| || || || | || ||| | ||| ||||||||| | |||||| Sbjct 11562 GGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGT 11621 Score = 89.7 bits (98), Expect = 8e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 2071876 GTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTC 2071935 ||||| || | ||||| | || || || || ||| ||||| |||||||||||| || Sbjct 11185 GTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTC 11244 Query 2071936 AGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 2071994 |||| ||||| |||| || || |||||||| |||||||| ||| ||||||||| || Sbjct 11245 AGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACC 11303 >seq201 Length=168916 Score = 105 bits (116), Expect = 1e-16 Identities = 180/259 (69%), Gaps = 9/259 (3%) Strand=Plus/Plus Query 794399 TCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458 |||| ||||| ||||||| ||| ||| ||||| || ||||| |||||||| | | Sbjct 78068 TCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAAATGCCTTCGACGGCAGAGA 78127 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTT---GATCCACTTCATCG 794515 | ||||||| || | ||| || | || | || |||| ||||||||||| | Sbjct 78128 ATGCGACGAGGCGTTGGGCGAAGCT----AGAC--TCCTTGTCTGAGATCCACTTCAAGG 78181 Query 794516 CCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCT 794575 |||| || ||||| || | | |||| | || || |||||| |||||| | | || Sbjct 78182 CCCAGTCAGCCTTCTTGCGGATGCAGGGGATAGTATCAATGGCGTCAAAGAGATAGGACT 78241 Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635 | | || || |||| ||||||||||||||| | ||| |||||||||| |||| Sbjct 78242 TTTGTTTGGGATCTTTGATGTAGGTGTCGATGAGCAAGCTGTACATCTCTGAGTGAATGT 78301 Query 794636 TTTCGATGGCGATCTGGAA 794654 ||||||| || |||||| Sbjct 78302 TTTCGATCATGACCTGGAA 78320 >seq368 Length=133877 Score = 89.7 bits (98), Expect = 8e-12 Identities = 100/130 (77%), Gaps = 8/130 (6%) Strand=Plus/Minus Query 2233090 GGTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCGTCAGACGAGGC 2233149 ||| || |||||||| |||||||||||||| || || || |||||| | || | ||| | Sbjct 65698 GGTTGCATTTCCCACGGAGACCGTCTATGGTCTAGGTGCAGACGCGAC--CA-ATGAGCC 65642 Query 2233150 CGTA----CAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGC 2233205 | | ||| ||||||||| |||||| ||||||||| |||||||| ||||||| | Sbjct 65641 TGCAATCTCAG-GCATCTTTGCCGCCAAAGGCCGACCGAGTGACAACCCGCTCATCGTCC 65583 Query 2233206 ACGTGGCCTC 2233215 |||| || || Sbjct 65582 ACGTTGCATC 65573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916151407517027