Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq49 118 7e-22
seq151 102 5e-17
seq82 84.2 1e-11
>seq49
Length=72059
Score = 118 bits (130), Expect = 7e-22
Identities = 107/135 (79%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809
|||||||| || | |||||||||||| | || ||||||||||||||| ||||| ||
Sbjct 34558 TCCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGA 34617
Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869
|| |||| |||| || |||||||| |||||||||||||| ||||||||||| | ||
Sbjct 34618 CAGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGG 34677
Query 34870 CACCCCCTCCTTGTC 34884
| || ||||||||
Sbjct 34678 GATGCCTTCCTTGTC 34692
>seq151
Length=50061
Score = 102 bits (112), Expect = 5e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|||| |||| || | ||||||||||||||||| || ||||| || || |||| ||
Sbjct 37703 CTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCA 37644
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||| |||||| || || ||||||| ||| || || || | || | ||||| ||
Sbjct 37643 TCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTA 37584
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || ||| |||||| | || | || | || || || | || ||
Sbjct 37583 TCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATA 37524
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||||||| || | |||||| |||||||||||||||
Sbjct 37523 GTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATG 37488
Score = 86.0 bits (94), Expect = 4e-12
Identities = 150/216 (69%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||||| || || || || ||||| ||||| || |||| | ||
Sbjct 37244 AGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCT 37185
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| ||||| || || || ||||| ||||| | || | || ||||||||
Sbjct 37184 TCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCC 37125
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| || ||| |||||| |||| || ||
Sbjct 37124 TGGATCTTGGACTTCAC--AT--TGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGAT 37069
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || || ||||| || ||||| |||||
Sbjct 37068 GGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37033
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||||||||| || | || | || || | ||| ||||| |||||
Sbjct 37452 CTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAA 37393
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| |||||| ||||| |||| | || |||||||| | || || ||| ||
Sbjct 37392 GATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCTTGAATCTTCGATTTTACATT 37333
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| || | || || || | || |||||||| || || | |||||| ||
Sbjct 37332 GTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGAC 37273
Query 34966 AAAGATCTGCAT 34977
|||||| |||||
Sbjct 37272 AAAGATTTGCAT 37261
>seq82
Length=64492
Score = 84.2 bits (92), Expect = 1e-11
Identities = 135/192 (70%), Gaps = 8/192 (4%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
|||| || ||||| || || || | || |||| || |||||||| ||||||||||
Sbjct 45250 CCTTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 45309
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| || || ||||| | || | || ||||| || | || || ||||||
Sbjct 45310 TCAAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGT--- 45366
Query 34908 CTATCGATTC-ATTGGCC---TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| |||||| || || | ||||| |||| ||| |||||||| ||||||||||||||
Sbjct 45367 -TGTCGATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 45425
Query 34964 ACAAAGATCTGC 34975
|| ||| | |||
Sbjct 45426 ACGAAGCTGTGC 45437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325689255342767
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |