Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq151 127 2e-24
>seq151
Length=50061
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||||||||| || ||| || || ||||| || || || | || ||||| |||
Sbjct 37701 CAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCATC 37642
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| | ||| ||||| ||| | ||||||| || |||||||| |||||||||||||| ||
Sbjct 37641 TTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTATC 37582
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | ||| ||||| | || | |||||| ||| ||| ||||| | || |||||
Sbjct 37581 CTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAGT 37522
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || ||||| || ||||| ||||||||
Sbjct 37521 CTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 37489
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | ||| || || || | ||| || || || || || || |||||||| ||
Sbjct 37487 CCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTG 37428
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || ||| || || | |||||| ||||| | ||||||| ||| || |||||||||
Sbjct 37427 AGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGA 37368
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || |||||||| ||| || | ||| ||| | || | ||||| || ||| ||
Sbjct 37367 ATTCCTTCCTTGTCTTG-AATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCAC 37309
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| || || || || |||||||| ||||| || ||||| || |||||
Sbjct 37308 TTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385215007490913
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |