Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq148 95.1 9e-14 seq51 95.1 9e-14 >seq148 Length=51035 Score = 95.1 bits (104), Expect = 9e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 ||||| || ||||| | ||||| |||||||||||| ||||| |||| ||| | || ||| Sbjct 31326 GAATTCTTTTTCCACGCCATGGCCGGTCGTGAAGGTCTTATTGATACCGCTGTCAAGACT 31385 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGA 435239 || || |||||||| |||||| | |||||||||| |||||||| Sbjct 31386 GCCGAGACTGGTTACATTCAACGCCGACTTGTCAAGGCTCTTGAAGA 31432 >seq51 Length=71985 Score = 95.1 bits (104), Expect = 9e-14 Identities = 191/283 (67%), Gaps = 3/283 (1%) Strand=Plus/Plus Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 |||| ||||| | ||||||| | |||| |||| ||||| | || ||||| | Sbjct 18476 TATCGAAATCCTGTCCTCCCAGGTGGGTATCACCTGCGGTAGCCTTGACAGTGAAAACAC 18535 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 || ||| || ||| || | ||||| || |||||||| | |||| | || || | Sbjct 18536 CACCTTGAATGTTCAAGAGGGAGACATCGAAAGTGCCACCACCGAGATCATAGATCAGAA 18595 Query 282312 CATTCATTTCTTTGTCTTGGTTTTTATCA---AGACCATACGCAAAAGCAGCAGCAGTTG 282368 | || ||| ||||| || | | ||||| || |||| |||||| || || | Sbjct 18596 CGTTTCGTTCCTTGTCAGACTTGCCAGAACCGAGACCGTAGGCAATAGCAGCCGCGGTAG 18655 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 | || || || || | | ||| || ||||| ||||| || ||||| || ||||||| Sbjct 18656 GCTCGTTGATGATGCGGAGAACGTTGAGACCGGCAATGGCACCGGCATCCTTGGTGGCTT 18715 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 ||||||| ||||| || || || |||||||| ||||| || Sbjct 18716 GTCTTTGATTGTCGTTGAAGTAGGCGGGAACAGTGATAACAGC 18758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740586557473818