Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq292 183 3e-41 seq151 120 3e-22 seq201 100 3e-16 seq82 84.2 2e-11 seq49 82.4 7e-11 >seq292 Length=28646 Score = 183 bits (202), Expect = 3e-41 Identities = 1100/1732 (64%), Gaps = 63/1732 (4%) Strand=Plus/Plus Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA-GTCGCTTTATCTTCATCTC 148120 || |||||||| || ||||||||||| ||||| | | || | || || || || || Sbjct 10072 TGATCAATGAAAGCACCACGGTCAGCAGCCATCTGGAGGACGGTGCGTTGGCTG-ATTTC 10130 Query 148121 CCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGA 148180 |||| |||||||||| || ||||| | | | || ||| | |||| ||| | || Sbjct 10131 CCAGACCGTCTTGTATAGAGCTTTGATGTCAGCAGGGATGTTGGGGATGTTCTGAATGGA 10190 Query 148181 GCCGCGGTGCGCAAAAAT-CTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCA 148239 ||||| | ||||| || ||| || ||| | ||| | | || || || | || Sbjct 10191 GCCGCCTTCCGCAATGATTCTG-TTCTTCATGTTGTCGGACCAGAGACCAAGGTCAACCA 10249 Query 148240 GGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGAT 148299 || | | || | |||| || || || || || || || | ||| || || | Sbjct 10250 AATCCTTCAAGAGCCAGGGATTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGT 10309 Query 148300 ACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTG 148359 | | |||| ||| | || || || | |||||||||||||| || || | ||| | || Sbjct 10310 AGATGTTGGACGTGTATGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATG 10369 Query 148360 CCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCT 148419 | || ||||| || || || || |||||||| | ||| | ||| | | | ||| Sbjct 10370 CAGTAGGCATAGGGGCAACAAGGAGAGAGTTGCGAACACCATG-TTTAGCAATCTCAGCT 10428 Query 148420 T-CAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGA 148478 | || || |||| ||||| || || || || || |||||||| || ||||| || Sbjct 10429 TTCAATGCATCCCAATCCCATAGATCTGAAGGAGTAACATTCCACATATCATACTGAAGG 10488 Query 148479 ATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGT 148538 || || | | ||||||||||| || | || || || || || || ||| Sbjct 10489 ATACCTTGTGAGACCGGGCTGCCCTCATAGGTCTCATAGGGACCTTGTTCCTTGGCGAGT 10548 Query 148539 TCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGC 148598 ||||| ||| || || | | ||| || || ||| |||||| ||||||| | Sbjct 10549 TCGCATGACGCAGTCAGAGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGA 10608 Query 148599 GCCGCCGACTCGCTT-TCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTG 148657 ||| || | ||| | || | ||||| | || || || ||||| ||||| Sbjct 10609 CGGGCCT-CTGGAGAGTCGAAAGGAAGACGCAAAGCAAGGAAGGCATCTGCAAGACCCTG 10667 Query 148658 TACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC---GG 148714 || || | |||| || |||||| | |||| | || ||| || || Sbjct 10668 AACACCAAGACCAACAGGTCGGTGTCGGAAGTTGCTCTTCCTGGCT---TCGGGCACAGG 10724 Query 148715 ATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAA-TTC-T 148771 |||| |||| ||||||||||||| |||| || || || || | |||| ||| | Sbjct 10725 GTAGTAGTTGATATCGATGATCTTGTTCAAGTTT-CGAGTGACGACTTGGGTAACTTCAT 10783 Query 148772 GCGCA--GC--AATTCAAAATC-----GTACTTGTCATCTACGATGCATCGGTTCACGGC 148822 | | || || ||| | || | |||| ||| |||| | | | | || Sbjct 10784 GAAGACGGCCAAAGTCATATTCACCTCGGGCTTG--ATCGACGAAGGTTGGA---AGAGC 10838 Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882 | |||||| |||||||| || || ||||||| ||||| |||||||| || || || | Sbjct 10839 CAGAGAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGT 10898 Query 148883 GCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGC 148942 |||||||||| || ||| |||| |||||| || |||||||| ||||||| || Sbjct 10899 GCACAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGC 10958 Query 148943 GTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATG 149002 |||||||| ||||| || || ||||| || ||| | ||| || || | || Sbjct 10959 ATCCTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTCTGTGCTTC---TAGGATCGCATA 11015 Query 149003 C---AGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGT--A 149057 | | | ||| || || ||| || ||||| | ||| ||| || | Sbjct 11016 CCACAACTTCTGGGCCTTGACCGTCTGACGACCTCGTCCCTCTTTCTC--ATACTGTTCA 11073 Query 149058 TACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCAC 149117 || || ||||| ||||||| ||| ||| | || || || || || || || Sbjct 11074 TAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAG 11133 Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177 | || | ||| | || | | || || |||| || ||||| || ||| || Sbjct 11134 AACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGT 11193 Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGC 149237 || || | | ||| || || ||||| || ||| | |||||| ||| Sbjct 11194 GCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGC 11253 Query 149238 ACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTT- 149296 ||| | ||||||||||| ||||| | || | || | || || ||||| Sbjct 11254 CAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTA 11313 Query 149297 --GCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATG 149354 ||| |||||||| || | || | ||||||| || || |||| ||| || |||| Sbjct 11314 TTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGG---AATG 11370 Query 149355 ---CCACTGGCAGTGCCGTTAGTAGAGCTAATGC--GA--CTGCCGCGCGCTCGCACTTT 149407 ||| ||| ||||||||| || | ||| || | | || || ||| | Sbjct 11371 AGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCAATGA 11430 Query 149408 GTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGC 149465 | |||||| ||| || ||||| || || ||| ||||| || || ||| ||| Sbjct 11431 G----CGTTGAGGCCAATACCGCCAGCAGT-CTTGGAGATCATAGCACAAGTCTT-GAGA 11484 Query 149466 GTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATT 149525 || ||| || ||||| |||||||| |||||| | || ||||| ||| ||| | Sbjct 11485 GTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAAT 11544 Query 149526 TGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGG 149585 || || | |||||||| ||||| || || |||||| || || | |||||| Sbjct 11545 TGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGG 11604 Query 149586 CTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCG 149645 ||| | | ||| | ||| | | | || |||||||| ||||||||||| | || Sbjct 11605 GACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCC 11664 Query 149646 ACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAG 149705 || ||||| ||||| || ||||||| ||| ||||||| || ||||| ||||||| || Sbjct 11665 ACACGCATGAGCATGTGTTGCGGTCTCTCGGCCACTTGTTTGCCAATCTTGAGCAGATAT 11724 Query 149706 CCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGT 149757 |||| | |||||| |||| ||||| | ||||| ||||| ||| ||| Sbjct 11725 GATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCGT 11776 >seq151 Length=50061 Score = 120 bits (132), Expect = 3e-22 Identities = 139/185 (75%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| || |||||||| || |||||||| | || ||| | | | |||||||| Sbjct 37010 AAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCA-TCCTCGAG 36952 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| ||| ||||||| || || || || ||||| |||||||||||||| || Sbjct 36951 CTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGAAT 36892 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | || ||| ||| ||| || |||| ||||| ||| ||||| Sbjct 36891 CTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCC 36832 Query 133634 GGTCA 133638 ||||| Sbjct 36831 GGTCA 36827 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || ||||| || || ||||| || | | ||| ||| ||||| |||||||| Sbjct 37229 GTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCG 37170 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || ||||||| || || ||||||||||| || ||||||||||| |||||| ||| Sbjct 37169 GCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTGGACTTC 37110 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || ||| ||| ||| || || | |||| ||| |||||||| ||||| Sbjct 37109 ACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGAGTC 37050 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 37049 TTGACGAAGATTTGCAT 37033 >seq201 Length=168916 Score = 100 bits (110), Expect = 3e-16 Identities = 249/373 (67%), Gaps = 15/373 (4%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || |||||||| || ||| ||| || ||||||| Sbjct 77651 CTGGTAATCACCGACACGCTTCTCGAAGAAGTTTGTCTTTCCCGCCAATGAGATGTTGTC 77710 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 |||||| ||| || || || || |||| ||| | || | | ||| || Sbjct 77711 CATAAAGCTGAAAGGATTCTGGGCATTGTAGTACTTCTTGTTTCCGAGGGCAAGGAGAAG 77770 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || |||||||| || | ||| | ||||||||||| |||| || Sbjct 77771 ACGGTCGGCAACGAACTCAATATATTGTTGCATCAGTTTGGCGTTCATGCCAAGCAGAGC 77830 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || ||||| || || ||||| |||||||| ||| | || ||||| ||| ||| | Sbjct 77831 GACAGGCAAAGCATCTGTCAAAAATTCCTTCTCGATGACAACAGCCTCGGTGATGATGTC 77890 Query 120591 GAGCAT-AGTGTGG--CCGGGCAT---CTTGTGTTCGATGCGCGTTCGGTAGTACAGGCA 120644 || ||| ||| ||||| | |||| | | | ||| || | || || Sbjct 77891 CTCGATGAGTTTGGGATCGGGCTTATACTTGAGGT-GTTGC---ATCAG-----AAGACA 77941 Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704 |||||||| || |||| ||||| || ||||| || ||||| || ||||||| ||| Sbjct 77942 AGCAAAGTCGGTATGCATACCCTCATCACGCGAGATGAGCTCATTCGAGAACGTCAAGCC 78001 Query 120705 GGGCATGATGCCT 120717 ||||| | |||| Sbjct 78002 TGGCATAAGGCCT 78014 >seq82 Length=64492 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| || |||||||| ||| | || | ||||| ||||| || |||||||||||||| Sbjct 45285 TCCTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTA 45344 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | || |||| | ||| || || | ||||| | Sbjct 45345 TCTTGGATCTTGGACTTGACGTTGTCGATTGTATCGGACGACTCGACCTCAAGGGTGATG 45404 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| || || || || ||||| Sbjct 45405 GTCTTGCCCGTGAGGGTCTTGACGAA 45430 >seq49 Length=72059 Score = 82.4 bits (90), Expect = 7e-11 Identities = 85/109 (78%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || ||| | | | || || || |||||||| Sbjct 34589 GTTGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCA-TCTTCAAGTTGCTTGCC 34647 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTG 133571 ||| | || || || |||||||| |||||||||||||||||||| ||| Sbjct 34648 GGCGAAGATCAGGCGTTGCTGGTCAGGAGGGATGCCTTCCTTGTCTGTG 34696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483415403815320