Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq292 113 1e-19 >seq292 Length=28646 Score = 113 bits (124), Expect = 1e-19 Identities = 287/429 (67%), Gaps = 11/429 (3%) Strand=Plus/Minus Query 110674 CTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATC 110733 |||| | ||| || |||| ||| | | ||||||||| ||||||| |||||| | | Sbjct 11383 CTTCCAATGGTCTCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTATGTGGACC 11324 Query 110734 AAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATA 110790 | ||||| |||| | || | ||||| |||||||| || || ||||| | ||| Sbjct 11323 AGGGTGGCAATAAGCGTCCCGGTGCCTTTGCCATCTATCTGGAGCCATGGCACGCGGATG 11264 Query 110791 TATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATT 110850 | || || | | | || | || || || ||| ||||| | || ||||| | Sbjct 11263 TCTTCGATTGGCTGAACCTGAGAAAGAACCACGGAAAGGAAGAGGTTCGCGCCCGTGACT 11204 Query 110851 TATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATG- 110909 | ||||||||| | |||| | | ||| ||||||||| |||||| | |||| | || | Sbjct 11203 TGTTTTATGCACTTTGGACTCCGGATCTATTCATGAGACGTGT-CGAGAAGAAC-CAAGA 11146 Query 110910 -TGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTT 110968 ||| |||| | ||||||||| | || || || ||||||| ||||| | || || Sbjct 11145 CTGGACTCTGTTCTGTCCTCATGAGGCACCGGGCCTTGCTGATGTCTATGGCGAGGAATT 11086 Query 110969 TGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCGCAAACAAATTCCAGCTC 111027 || | ||| || ||| | ||||| ||||| || | || | || || || || | Sbjct 11085 CGATGCCCTCTATGAACAGTATGAGAAAGAGGGACGAGGTCGTCAGACGG--TCAAGGCC 11028 Query 111028 AAGAACTT-TGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTG 111086 |||| || |||| ||||| ||| |||| || ||||| ||||||||||| | Sbjct 11027 CAGAAGTTGTGGTATGCGATCCTAGAAGCACAGACCGAGACTGGGACTCCTTATATGCTT 10968 Query 111087 TATAAAGAT 111095 || || ||| Sbjct 10967 TACAAGGAT 10959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186799221007173