Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq292 113 1e-19
>seq292
Length=28646
Score = 113 bits (124), Expect = 1e-19
Identities = 287/429 (67%), Gaps = 11/429 (3%)
Strand=Plus/Minus
Query 110674 CTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATC 110733
|||| | ||| || |||| ||| | | ||||||||| ||||||| |||||| | |
Sbjct 11383 CTTCCAATGGTCTCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTATGTGGACC 11324
Query 110734 AAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATA 110790
| ||||| |||| | || | ||||| |||||||| || || ||||| | |||
Sbjct 11323 AGGGTGGCAATAAGCGTCCCGGTGCCTTTGCCATCTATCTGGAGCCATGGCACGCGGATG 11264
Query 110791 TATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATT 110850
| || || | | | || | || || || ||| ||||| | || ||||| |
Sbjct 11263 TCTTCGATTGGCTGAACCTGAGAAAGAACCACGGAAAGGAAGAGGTTCGCGCCCGTGACT 11204
Query 110851 TATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATG- 110909
| ||||||||| | |||| | | ||| ||||||||| |||||| | |||| | || |
Sbjct 11203 TGTTTTATGCACTTTGGACTCCGGATCTATTCATGAGACGTGT-CGAGAAGAAC-CAAGA 11146
Query 110910 -TGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTT 110968
||| |||| | ||||||||| | || || || ||||||| ||||| | || ||
Sbjct 11145 CTGGACTCTGTTCTGTCCTCATGAGGCACCGGGCCTTGCTGATGTCTATGGCGAGGAATT 11086
Query 110969 TGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCGCAAACAAATTCCAGCTC 111027
|| | ||| || ||| | ||||| ||||| || | || | || || || || |
Sbjct 11085 CGATGCCCTCTATGAACAGTATGAGAAAGAGGGACGAGGTCGTCAGACGG--TCAAGGCC 11028
Query 111028 AAGAACTT-TGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTG 111086
|||| || |||| ||||| ||| |||| || ||||| ||||||||||| |
Sbjct 11027 CAGAAGTTGTGGTATGCGATCCTAGAAGCACAGACCGAGACTGGGACTCCTTATATGCTT 10968
Query 111087 TATAAAGAT 111095
|| || |||
Sbjct 10967 TACAAGGAT 10959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186799221007173
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |