Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq151 120 2e-22 >seq151 Length=50061 Score = 120 bits (132), Expect = 2e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 ||||||||||| ||||||||||| || || || ||||| || || || |||||| | || Sbjct 37700 AACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCATCT 37641 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 |||||||| || || ||||| ||||| ||||| ||||| | || | ||| ||||| || Sbjct 37640 TCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTATCC 37581 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 || || || | || | ||| | ||||| ||||| || || | ||| || || Sbjct 37580 TGGATCTT-TGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAGT 37522 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || || || || |||||||||||||| Sbjct 37521 CTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 37489 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| ||| || | || | ||| ||||| ||| || || ||||| || ||| | Sbjct 37487 CCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTG 37428 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| || ||||||||||| || || ||||| || || || || |||| Sbjct 37427 AGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGA 37368 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| ||| ||| | || |||| ||| | ||||| ||||||||| Sbjct 37367 ATTCCTTCCTTGTCTTGAATCTTC-GATTTTACATTGTCGATCGTGTCTGATGATTCCAC 37309 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || || || || |||||||| |||||| Sbjct 37308 TTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCATA 37260 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||| || ||||| |||||||| |||||||| || Sbjct 37260 ACCACCACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACT 37201 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| |||| || | ||| || ||||||||||| | ||| || || || | || Sbjct 37200 GAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGG 37141 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| || || ||| |||| ||| | ||| ||||| || || | Sbjct 37140 AATACCTTCCTTGTCCTGGATCTTGGACTTC-ACATTGTCGATGGTATCGCTGGACTCGA 37082 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || || || || | || || || ||||| |||||| Sbjct 37081 CCTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCATA 37032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328700422570560