Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq292 161 9e-35
seq201 111 1e-19
seq151 98.7 9e-16
>seq292
Length=28646
Score = 161 bits (178), Expect = 9e-35
Identities = 621/960 (65%), Gaps = 29/960 (3%)
Strand=Plus/Plus
Query 147465 AGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCA 147524
||| || ||||||||||| || |||| || | | | ||||||| || ||||| | |||
Sbjct 10842 AGAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCA 10901
Query 147525 CAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTC 147584
||| ||| || || |||| || | ||| ||||| ||| ||||| || ||
Sbjct 10902 CAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATC 10961
Query 147585 TTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATG 147641
||| | ||||| || || || |||||| || | ||| | ||| | |||
Sbjct 10962 CTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTCTGTGCTTCTAGGATCGCATACCA--- 11018
Query 147642 CAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAA 147701
|| | ||| || ||| ||| ||| || ||||| || || ||| | || || |
Sbjct 11019 CAACTTCTGGGCCTTGACCGTCTGACGACCTCGTCCCTCTTTCTCATACTGTTCATAGAG 11078
Query 147702 CCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAG 147761
|| || || ||||| ||| ||| |||||||| || || ||| ||||| | |||
Sbjct 11079 GGCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAG 11138
Query 147762 CGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTA 147821
| ||| | || | | || |||| ||| || |||||||| ||| || || ||
Sbjct 11139 AGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATA 11198
Query 147822 CATAAGATCGCGCGCTTTGCAATCCTCGGCGC--CCATGTTGCGTT-TCAAATTAAGC-A 147877
| | || || || || | |||| | || || | | || ||| || ||| |
Sbjct 11199 AAACAAGTCACGGGC---GCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCA 11255
Query 147878 CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT- 147936
| | ||| || |||||||| || || | |||| ||| | ||||| ||||||
Sbjct 11256 ATCGA-AGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTAT 11314
Query 147937 --CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGC 147994
|| |||||||| |||| || | ||||||| || || || | |||||| || |
Sbjct 11315 TGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGAC 11374
Query 147995 CGCTCGCAGTGCCGTTGGT---GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCA 148051
| | | |||||||||||| || | || | | || || || | ||
Sbjct 11375 CATTGGAAGTGCCGTTGGTCCCGGCA---ATATAGGAACCAGTAGCACGAATGCAATGAG 11431
Query 148052 CGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAA-TCGCCCAA-TGTCG 148108
|||| | |||||| ||||| || || ||| || || ||| ||| || | |||||
Sbjct 11432 CGTTGAGGCCAATACCGCCAGCAGT-CTTGGAGATCATAGCACAAGTCTTGAGAGTGTCG 11490
Query 148109 TGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCG 148168
| | || || || |||||||| | ||| | | | | ||| || || || ||| ||| |
Sbjct 11491 T--AAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAG 11548
Query 148169 GAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCA 148228
| | | || || || ||| || || ||| ||||| || || | || || ||
Sbjct 11549 GTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACA 11608
Query 148229 TCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGC 148288
| | | || ||||| || || | |||||||| || || || ||||| | || || |
Sbjct 11609 TGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCCACAC 11668
Query 148289 GCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCAT 148348
||||||||||||| || |||| ||||| ||||| ||| |||||||| ||||||
Sbjct 11669 GCATGAGCATGTGTTGCGGTCTCTCGGCCACTTGTTTGCCAATCTTGAGCAGATATGATC 11728
Query 148349 TTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
|||| | || ||| | || ||||| | ||| | || ||| | |||||| |||||||||
Sbjct 11729 TTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCGTAAACGATGGCCG 11788
>seq201
Length=168916
Score = 111 bits (122), Expect = 1e-19
Identities = 252/370 (68%), Gaps = 17/370 (5%)
Strand=Plus/Minus
Query 46907 AGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACA 46966
|||| | ||||| ||| |||||||| || ||| | |||||||| || || || | ||
Sbjct 78014 AGGCCTTATGCCAGGCTTGACGTTCTCGAATGAGCTCATCTCGCGTGATGAGGGTATGCA 77955
Query 46967 CACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGAGAA--ATT--AAACTCG 47021
|| |||||||| ||||| || | ||| || | | | || || || ||||||
Sbjct 77954 TACCGACTTTGCTTGTCTTCTGATGCAACAC-CTCAAGTATAAGCCCGATCCCAAACTC- 77897
Query 47022 GACACGATCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCG 47081
||| | ||| | | ||||| || |||||| ||||| ||||| || |
Sbjct 77896 ------ATCGAGGACATCATCACCGAGGCTGTTGTCATCGAGAAGGAATTTTTGACAGAT 77843
Query 47082 GCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAATATATTGAGTT 47140
|| |||| ||||| |||| ||||||||||| || || ||| |||||||||||||
Sbjct 77842 GCTTTGCCTGTCGCTCTGCTTGGCATGAACGC-CAAACTGATGCAACAATATATTGAGTT 77784
Query 47141 TGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTTTAATGCTCGTAATCC 47200
|| || || ||||| | | |||||| | ||| || | ||||| | |||||
Sbjct 77783 CGTTGCCGACCGTCTTCTCCTTGCCCTCGGAAACAAGAAGTACTACAATGCCCAGAATCC 77724
Query 47201 GTTTGAG-TTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAG 47259
||| || |||||| ||||||| || | | ||| || || || || |||||||| || |
Sbjct 77723 -TTTCAGCTTTATGGACAACATCTCATTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTG 77665
Query 47260 TCGGAGAGTA 47269
|||| || ||
Sbjct 77664 TCGGTGATTA 77655
>seq151
Length=50061
Score = 98.7 bits (108), Expect = 9e-16
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| | ||| | |||||||| | | | || ||||| ||||||||||| || |||| |||
Sbjct 37026 ACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGT 36967
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| ||||||||||| |||| | || ||||| |||||||| ||||| |||||
Sbjct 36966 GCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCC 36907
Query 132022 TTCTTTATC 132030
||| || ||
Sbjct 36906 TTCCTTGTC 36898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476605879827480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |