Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq292 161 9e-35 seq201 111 1e-19 seq151 98.7 9e-16 >seq292 Length=28646 Score = 161 bits (178), Expect = 9e-35 Identities = 621/960 (65%), Gaps = 29/960 (3%) Strand=Plus/Plus Query 147465 AGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCA 147524 ||| || ||||||||||| || |||| || | | | ||||||| || ||||| | ||| Sbjct 10842 AGAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCA 10901 Query 147525 CAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTC 147584 ||| ||| || || |||| || | ||| ||||| ||| ||||| || || Sbjct 10902 CAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATC 10961 Query 147585 TTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATG 147641 ||| | ||||| || || || |||||| || | ||| | ||| | ||| Sbjct 10962 CTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTCTGTGCTTCTAGGATCGCATACCA--- 11018 Query 147642 CAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAA 147701 || | ||| || ||| ||| ||| || ||||| || || ||| | || || | Sbjct 11019 CAACTTCTGGGCCTTGACCGTCTGACGACCTCGTCCCTCTTTCTCATACTGTTCATAGAG 11078 Query 147702 CCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAG 147761 || || || ||||| ||| ||| |||||||| || || ||| ||||| | ||| Sbjct 11079 GGCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAG 11138 Query 147762 CGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTA 147821 | ||| | || | | || |||| ||| || |||||||| ||| || || || Sbjct 11139 AGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATA 11198 Query 147822 CATAAGATCGCGCGCTTTGCAATCCTCGGCGC--CCATGTTGCGTT-TCAAATTAAGC-A 147877 | | || || || || | |||| | || || | | || ||| || ||| | Sbjct 11199 AAACAAGTCACGGGC---GCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCA 11255 Query 147878 CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT- 147936 | | ||| || |||||||| || || | |||| ||| | ||||| |||||| Sbjct 11256 ATCGA-AGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTAT 11314 Query 147937 --CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGC 147994 || |||||||| |||| || | ||||||| || || || | |||||| || | Sbjct 11315 TGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGAC 11374 Query 147995 CGCTCGCAGTGCCGTTGGT---GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCA 148051 | | | |||||||||||| || | || | | || || || | || Sbjct 11375 CATTGGAAGTGCCGTTGGTCCCGGCA---ATATAGGAACCAGTAGCACGAATGCAATGAG 11431 Query 148052 CGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAA-TCGCCCAA-TGTCG 148108 |||| | |||||| ||||| || || ||| || || ||| ||| || | ||||| Sbjct 11432 CGTTGAGGCCAATACCGCCAGCAGT-CTTGGAGATCATAGCACAAGTCTTGAGAGTGTCG 11490 Query 148109 TGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCG 148168 | | || || || |||||||| | ||| | | | | ||| || || || ||| ||| | Sbjct 11491 T--AAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTGAG 11548 Query 148169 GAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCA 148228 | | | || || || ||| || || ||| ||||| || || | || || || Sbjct 11549 GTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACA 11608 Query 148229 TCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGC 148288 | | | || ||||| || || | |||||||| || || || ||||| | || || | Sbjct 11609 TGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCCACAC 11668 Query 148289 GCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCAT 148348 ||||||||||||| || |||| ||||| ||||| ||| |||||||| |||||| Sbjct 11669 GCATGAGCATGTGTTGCGGTCTCTCGGCCACTTGTTTGCCAATCTTGAGCAGATATGATC 11728 Query 148349 TTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 |||| | || ||| | || ||||| | ||| | || ||| | |||||| ||||||||| Sbjct 11729 TTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCGTAAACGATGGCCG 11788 >seq201 Length=168916 Score = 111 bits (122), Expect = 1e-19 Identities = 252/370 (68%), Gaps = 17/370 (5%) Strand=Plus/Minus Query 46907 AGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACA 46966 |||| | ||||| ||| |||||||| || ||| | |||||||| || || || | || Sbjct 78014 AGGCCTTATGCCAGGCTTGACGTTCTCGAATGAGCTCATCTCGCGTGATGAGGGTATGCA 77955 Query 46967 CACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGAGAA--ATT--AAACTCG 47021 || |||||||| ||||| || | ||| || | | | || || || |||||| Sbjct 77954 TACCGACTTTGCTTGTCTTCTGATGCAACAC-CTCAAGTATAAGCCCGATCCCAAACTC- 77897 Query 47022 GACACGATCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCG 47081 ||| | ||| | | ||||| || |||||| ||||| ||||| || | Sbjct 77896 ------ATCGAGGACATCATCACCGAGGCTGTTGTCATCGAGAAGGAATTTTTGACAGAT 77843 Query 47082 GCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAATATATTGAGTT 47140 || |||| ||||| |||| ||||||||||| || || ||| ||||||||||||| Sbjct 77842 GCTTTGCCTGTCGCTCTGCTTGGCATGAACGC-CAAACTGATGCAACAATATATTGAGTT 77784 Query 47141 TGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTTTAATGCTCGTAATCC 47200 || || || ||||| | | |||||| | ||| || | ||||| | ||||| Sbjct 77783 CGTTGCCGACCGTCTTCTCCTTGCCCTCGGAAACAAGAAGTACTACAATGCCCAGAATCC 77724 Query 47201 GTTTGAG-TTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAG 47259 ||| || |||||| ||||||| || | | ||| || || || || |||||||| || | Sbjct 77723 -TTTCAGCTTTATGGACAACATCTCATTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTG 77665 Query 47260 TCGGAGAGTA 47269 |||| || || Sbjct 77664 TCGGTGATTA 77655 >seq151 Length=50061 Score = 98.7 bits (108), Expect = 9e-16 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||| | |||||||| | | | || ||||| ||||||||||| || |||| ||| Sbjct 37026 ACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGT 36967 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| ||||||||||| |||| | || ||||| |||||||| ||||| ||||| Sbjct 36966 GCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCC 36907 Query 132022 TTCTTTATC 132030 ||| || || Sbjct 36906 TTCCTTGTC 36898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605879827480