Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq292 98.7 9e-16 seq151 96.9 3e-15 >seq292 Length=28646 Score = 98.7 bits (108), Expect = 9e-16 Identities = 195/286 (68%), Gaps = 12/286 (4%) Strand=Plus/Plus Query 138126 AGCACGAATT---TGAGTTACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGC 138182 ||||||||| |||| |||||||||| || ||||| | || || ||||| || Sbjct 11415 AGCACGAATGCAATGAG---CGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGC 11471 Query 138183 ACAATCGTTGAGAGTTCTATAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATA 138242 |||| |||||||| || || || | |||||||| || | |||| || | | Sbjct 11472 ACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAA 11531 Query 138243 ACACGACGACATTTGAGGCATTTTCA---TGCCAGCCGAGAATAGAGTGGGACTAGCGTG 138299 || || |||| |||||| || | |||| || ||| ||||| ||| ||||| Sbjct 11532 GCATGAGGACAATTGAGG---TTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTG 11588 Query 138300 GGTAAACATTTTCGAGCGCATCAATCTATATGACTCGATCGCACTCTCGATATCATCACC 138359 ||| || ||| | ||| | | || | ||| ||||| ||||||| ||||| || Sbjct 11589 GGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCC 11648 Query 138360 ATGAATCTGAAGAGCGACACGCATCAGCATGTGTTGAGGTCTCTCG 138405 ||| || || || |||||||| ||||||||||| ||||||||| Sbjct 11649 ATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCG 11694 >seq151 Length=50061 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || | ||||| || | ||||| | || ||||| ||| | Sbjct 37033 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37092 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| ||||| | || || || || || || || ||||| || ||||| || Sbjct 37093 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37152 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | ||||||| | |||||| ||||||||||| | | | | |||| || ||||| Sbjct 37153 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37212 Query 25355 ATTCAAAAAGAATCCACCATTCA 25377 || ||||||||||| || |||| Sbjct 37213 ATCCAAAAAGAATCGACTCTTCA 37235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445089431633760