Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq292 109 8e-18
seq201 100 4e-15
>seq292
Length=28646
Score = 109 bits (120), Expect = 8e-18
Identities = 256/388 (66%), Gaps = 15/388 (4%)
Strand=Plus/Minus
Query 259795 CGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGT 259854
|||| | || || | |||||||||||||| || ||||| |||| || || |
Sbjct 11694 CGAGAGACCGCAACACATGCTCATGCGTGTGGCAGTTGGCATCCATGGAGATG---ACAT 11638
Query 259855 CGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCAC 259914
||| || ||| | ||| |||||| | |||||| ||| ||| |||||
Sbjct 11637 CGAGAAGGCGATAGAG------------ACCTACAACCTCATGTCCCAGAAGTGCTTCAC 11590
Query 259915 CTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTT 259974
| || | || || || || ||||||||||| |||| || || || || |||||
Sbjct 11589 CCACGCCTCTCCAACTCTGTTCAATGCCGGCACTCCGCAACCTCAATTGTCCTCATGCTT 11530
Query 259975 TCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGC 260034
|| | |||||||| | || || ||||| || || ||||| |||||| || ||
Sbjct 11529 CTTGGTCGACATGAAAGAGGACAGCATTGAGGGAATTTACGACACTCTCAAGACTTGTGC 11470
Query 260035 GCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGG 260094
| ||||||||| | || ||||| || || | ||| || | || || | ||
Sbjct 11469 TATGATCTCCAAGACTGCTGGCGGTATTGGCCTCAACGCTCATTGCATTCGTGCTACTGG 11410
Query 260095 CGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTT 260154
|||| | || || ||||||||| ||||| || || | ||||||||||| || ||
Sbjct 11409 TTCCTATATTGCCGGGACCAACGGCACTTCCAATGGTCTCATTCCCATGCTTCGTGTCTT 11350
Query 260155 TAACGACACGGCGCGCTACGTCGACCAG 260182
||| |||| || || || || ||||||
Sbjct 11349 CAACAACACTGCCCGTTATGTGGACCAG 11322
>seq201
Length=168916
Score = 100 bits (110), Expect = 4e-15
Identities = 179/258 (69%), Gaps = 9/258 (3%)
Strand=Plus/Minus
Query 1456000 TTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTAC 1456059
|||||| || ||||||||||| ||||| || | ||| | || ||||||||||||
Sbjct 78320 TTCCAGGTCATGATCGAAAACATTCACTCAGAGATGTACAGCTTGCTCATCGACACCTAC 78261
Query 1456060 GTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTG 1456119
|||| || || | ||| | | |||||| |||||| || || | || | |
Sbjct 78260 ATCAAAGATCCCAAACAAAAGTCCTATCTCTTTGACGCCATTGATACTATCCCCTGCATC 78201
Query 1456120 AGGAAAAAGGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTG 1456176
| || ||||| |||||||| ||||||||||| |||||||| || | ||| |
Sbjct 78200 CGCAAGAAGGCTGACTGGGCCTTGAAGTGGATCTCAGACAAGGAG----TCTA-GCTTCG 78146
Query 1456177 CCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG 1456235
|| | || ||||||| || | | |||||| ||||| || ||||| ||| ||| |
Sbjct 78145 CCCAACGCCTCGTCGCATTCTCTGCCGTCGAAGGCATTTTCTTCTCCGGCTCATTCGCCT 78086
Query 1456236 CCATCTTTTGGCTCAAGA 1456253
||||||| ||||| ||||
Sbjct 78085 CCATCTTCTGGCTGAAGA 78068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177725068508666
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |