Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq292 109 5e-19 seq151 109 5e-19 >seq292 Length=28646 Score = 109 bits (120), Expect = 5e-19 Identities = 294/448 (66%), Gaps = 9/448 (2%) Strand=Plus/Plus Query 130538 ATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATG 130597 |||||||| ||||| ||||||||||| ||||| || | ||| |||||||| | ||| | | Sbjct 10054 ATGTTGAGAGATTGGGATTGATCAATGAAAGCACCACGGTCAGCAGCCATCTGGAGGACG 10113 Query 130598 GTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGC 130657 || | | || ||||| | |||||||||||| | | |||| || ||| Sbjct 10114 GTGCGTTGGCTGATTTCCCAGACCGTCTTGTATAGAGCTTTGATGTCAGCAGGGATGTTG 10173 Query 130658 GCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTATCGTAC 130717 | || |||| | ||| | || || ||| ||| ||| || ||| || Sbjct 10174 GGGATGTTCTGAATGGAGCCGCCTTCCGCAATGATTCTGTTCTTCATG---TTGTCGGAC 10230 Query 130718 AAT---CCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCA 130774 | ||||| | || | ||| || | | ||| | || ||| || |||||| Sbjct 10231 CAGAGACCAAGGTCAACCAAATCCTTCAAGAGCCAGGGATTGACGACTTGGAATTCACCA 10290 Query 130775 GCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCG 130834 |||| || || | ||| |||||| |||| | || || ||| ||||||||||||| Sbjct 10291 GCCAACACACGACGGGAGTAGATGTTGGACGTGTATGGCTCGAAGCATTCGTTGTTGCCC 10350 Query 130835 AATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCG 130894 || ||||| | || | ||| || ||||| || || | ||||| || |||| ||| Sbjct 10351 AAGATTTGAGAGGTGGATGCAGTAGGCATAGGGGCAACAAGGAGAGAGTTGCGAACACCA 10410 Query 130895 TGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTG 130954 || | | || | |||||| ||||||||||||||||| | ||| | ||| Sbjct 10411 TGTTTAGCAATCTCAGCTTTCAATGCATCCCAATCCCATAGATCTGAAGGAGTAACA--- 10467 Query 130955 TTCCACATATCAAATTGTAGTATGCCTT 130982 |||||||||||| | || || || |||| Sbjct 10468 TTCCACATATCATACTGAAGGATACCTT 10495 >seq151 Length=50061 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || |||||||| || |||||||| || | |||| |||||||||| || || ||| Sbjct 37229 GTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCG 37170 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || |||||||||| ||||| || || || | ||| || || || ||||||| ||| Sbjct 37169 GCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTGGACTTC 37110 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | || || ||| || || || ||||| || | ||||| || ||||| Sbjct 37109 ACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGAGTC 37050 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 37049 TTGACGAAGATTTGCATA 37032 Score = 102 bits (112), Expect = 7e-17 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| || ||||| ||||| ||||| ||||| || |||| | |||| | || ||| Sbjct 37013 ACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCATCCTCG 36954 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 |||||||| |||||| |||||||||| |||||||| || || Sbjct 36953 AGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGG 36913 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094 ||| |||||||| | || || || |||||||||||||| | |||| | || Sbjct 37701 CAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCATC 37642 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| | || || || || | || | |||||||||||||| || | |||||||||||| Sbjct 37641 TTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTATC 37582 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 |||||| || | | | || | |||||| | | ||||||||| | || |||| Sbjct 37581 CTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAGT 37522 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || |||| || || |||||||| ||||| Sbjct 37521 CTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 37489 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || ||||| || | || | ||| | || || || || || || || ||||||| Sbjct 37489 TGCCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGC 37430 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | || ||||||| | ||||| || ||| | || | || ||||| ||||||| Sbjct 37429 TGAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCG 37370 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || ||||| ||| | | || | ||||||| | ||| | Sbjct 37369 GAATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCA 37310 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| || || || | ||||| |||| || || ||||||||||||||| Sbjct 37309 CTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCATA 37260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424929775253016