Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq292 250 3e-61
>seq292
Length=28646
Score = 250 bits (276), Expect = 3e-61
Identities = 892/1383 (64%), Gaps = 25/1383 (2%)
Strand=Plus/Minus
Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288
||||| ||||||| ||||| | || || ||||| || ||||| || | | ||||
Sbjct 11680 ACATGCTCATGCGTGTGGCAGTTGGCATCCATGGAGATGACATCGAGAAGGCGATAGAGA 11621
Query 104289 CATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTTCAATGCT 104347
| ||| || |||||||| | || |||| ||||| | ||||| || ||||||||
Sbjct 11620 CCTACAACCTCATGTCCCA-GAAGTGCTTCACCCACGCCTCTCCAACTCTGTTCAATGCC 11562
Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407
|| || || ||| ||| ||||| |||||| | ||| || || |||||| ||
Sbjct 11561 GGCACTCCGCAACCTCAATTGTCCTCATGCTTCTTGGTCGACATGAAAGAGGACAGCATT 11502
Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 104467
| || || || | ||||| | | ||||| ||||| ||| ||||| ||||||
Sbjct 11501 GAGGGAATTTACGACACTCTCAAGACTTGTGCTATGATCTCCAAGACTGCTGGCGGTATT 11442
Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 104527
|| | || ||| | | || | | || |||| ||||| || ||
Sbjct 11441 GGCCTCAACGCTCATTGCATTCGTGCTACTGGTTCCTATATTGCCGGGACCAACGGCACT 11382
Query 104528 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 104587
|| ||||| | ||||| |||||||| || || ||| ||| || || ||||| | ||
Sbjct 11381 TCCAATGGTCTCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTATGTGGACCAG 11322
Query 104588 GCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGAT 104641
| ||| ||||| || | | || ||||||| ||||||||||||||||||
Sbjct 11321 GGTGGCAATAAGCGTCCC---GGTGCCTTTGCCATCTATCTGGAGCCATGGCACGCGGAT 11265
Query 104642 ATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGAT 104701
|| | || | || | || | ||||| || | || |||| || ||| ||
Sbjct 11264 GTCTTCGATTGGCTGAACCTGAGAAAGAACCACGGAAAGGAAGAGGTTCGCGCCCGTGAC 11205
Query 104702 CTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT 104761
| || | || || |||| ||| ||||| ||||||| | || ||| ||| |
Sbjct 11204 TTGTTTTATGCACTTTGGACTCCGGATCTATTCATGAGACGTGTCGAGAAGAACCAAGAC 11145
Query 104762 TGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTT 104821
||| |||| || ||||| | ||||||| || || | |||| | || ||||| ||
Sbjct 11144 TGGACTCTGTTCTGTCCTCATGAGGCACCGGGCCTTGCTGATGTCTATGGCGAGGAATTC 11085
Query 104822 GAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCC 104881
|| ||||| || | |||| ||| |||| || || | | |||||| | || |
Sbjct 11084 GATGCCCTCTATGAACAGTATGAGAAAGAGGGACGAGGTCGTCAGACGGT-CAAGGCCCA 11026
Query 104882 GATGT-GTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTA 104940
|| || |||| | || || || | | || ||||||||||| || || || ||||||||
Sbjct 11025 GAAGTTGTGGTATGCGATCCTAGAAGCACAGACCGAGACTGGGACTCCTTATATGCTTTA 10966
Query 104941 CAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAA 105000
||| || ||||| ||| | ||||| || || ||||| |||| ||| ||| |||||
Sbjct 10965 CAAGGATGCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGGACAATCCGGAGCTCCAA 10906
Query 105001 TCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC 105060
||| || || ||||| | || | | | | |||||||| ||||| || || |||||
Sbjct 10905 TCTGTGCACGGAAATTGTCGAGTACAGTGCCCCAGATGAGATCGCTGTCTGCAATCTCGC 10846
Query 105061 ATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACT 105120
|| | ||||| || | | || |||| || | || ||| | || ||
Sbjct 10845 CTCTCTGGCTCTTCCAACCTTCGTCGATCAAGCCCGAGGTGAATATGACTTTGGCCGTCT 10786
Query 105121 CCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTA 105180
|| |||||||| || ||||| |||| | |||| | || |||| || | ||
Sbjct 10785 TCATGAAGTTACCCAAGTCGTCACTCGAAACTTGAACAAGATCATCGATATCAACTACTA 10726
Query 105181 CCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCA 105240
||| || || | || || | ||||||| || ||||||| ||||||||
Sbjct 10725 CCCTGTGCCCGAAGCCAGGAAGAGCAACTTCCGACACCGACCTGTTGGTCTTGGTGTTCA 10666
Query 105241 GGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGG 105299
|||||| || |||| ||| || ||||| || | | || || || || ||
Sbjct 10665 GGGTCTTGCAGATGCCTTCCTTGCTTTG-CGTCTTCCTTTCGACTCTCCAGAGGCCCGTC 10607
Query 105300 AAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGT 105359
|| |||| | || || || ||||| || || || ||||| ||| | ||
Sbjct 10606 AACTCAACATCCAAATTTTCGAAACCATCTACCATGCAGCTCTGACTGCGTCATGCGAAC 10547
Query 105360 TGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGC 105419
| || ||| | ||||| ||||| |||| |||||| || | |||||||| | |
Sbjct 10546 TCGCCAAGGAACAAGGTCCCTATGAGACCTATGAGGGCAGCCCGGTCTCACAAGGTATCC 10487
Query 105420 TTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA---CTA--CGACTGGGAAGCTCT 105474
|||| | |||||||| |||| || | | ||||| ||| || ||||| || |
Sbjct 10486 TTCAGTATGATATGT-GGAATGTTACTC----CTTCAGATCTATGGGATTGGGATGCATT 10432
Query 105475 CAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAAC 105534
|| | || | | ||| |||| ||| |||||| | || || ||||| ||
Sbjct 10431 GAAAGCTGAGATTGCTAAACATGGTGTTCGCAACTCTCTCCTTGTTGCCCCTATGCCTAC 10372
Query 105535 AGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACAT 105594
|| |||||| | ||||||||||| || || |||||||| || || |||||| | |||||
Sbjct 10371 TGCATCCACCTCTCAAATCTTGGGCAACAACGAATGCTTCGAGCCATACACGTCCAACAT 10312
Query 105595 CTA 105597
|||
Sbjct 10311 CTA 10309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583254289351320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |