Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq292 250 3e-61 >seq292 Length=28646 Score = 250 bits (276), Expect = 3e-61 Identities = 892/1383 (64%), Gaps = 25/1383 (2%) Strand=Plus/Minus Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288 ||||| ||||||| ||||| | || || ||||| || ||||| || | | |||| Sbjct 11680 ACATGCTCATGCGTGTGGCAGTTGGCATCCATGGAGATGACATCGAGAAGGCGATAGAGA 11621 Query 104289 CATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTTCAATGCT 104347 | ||| || |||||||| | || |||| ||||| | ||||| || |||||||| Sbjct 11620 CCTACAACCTCATGTCCCA-GAAGTGCTTCACCCACGCCTCTCCAACTCTGTTCAATGCC 11562 Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407 || || || ||| ||| ||||| |||||| | ||| || || |||||| || Sbjct 11561 GGCACTCCGCAACCTCAATTGTCCTCATGCTTCTTGGTCGACATGAAAGAGGACAGCATT 11502 Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 104467 | || || || | ||||| | | ||||| ||||| ||| ||||| |||||| Sbjct 11501 GAGGGAATTTACGACACTCTCAAGACTTGTGCTATGATCTCCAAGACTGCTGGCGGTATT 11442 Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAA 104527 || | || ||| | | || | | || |||| ||||| || || Sbjct 11441 GGCCTCAACGCTCATTGCATTCGTGCTACTGGTTCCTATATTGCCGGGACCAACGGCACT 11382 Query 104528 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 104587 || ||||| | ||||| |||||||| || || ||| ||| || || ||||| | || Sbjct 11381 TCCAATGGTCTCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTATGTGGACCAG 11322 Query 104588 GCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGAT 104641 | ||| ||||| || | | || ||||||| |||||||||||||||||| Sbjct 11321 GGTGGCAATAAGCGTCCC---GGTGCCTTTGCCATCTATCTGGAGCCATGGCACGCGGAT 11265 Query 104642 ATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGAT 104701 || | || | || | || | ||||| || | || |||| || ||| || Sbjct 11264 GTCTTCGATTGGCTGAACCTGAGAAAGAACCACGGAAAGGAAGAGGTTCGCGCCCGTGAC 11205 Query 104702 CTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT 104761 | || | || || |||| ||| ||||| ||||||| | || ||| ||| | Sbjct 11204 TTGTTTTATGCACTTTGGACTCCGGATCTATTCATGAGACGTGTCGAGAAGAACCAAGAC 11145 Query 104762 TGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTT 104821 ||| |||| || ||||| | ||||||| || || | |||| | || ||||| || Sbjct 11144 TGGACTCTGTTCTGTCCTCATGAGGCACCGGGCCTTGCTGATGTCTATGGCGAGGAATTC 11085 Query 104822 GAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCC 104881 || ||||| || | |||| ||| |||| || || | | |||||| | || | Sbjct 11084 GATGCCCTCTATGAACAGTATGAGAAAGAGGGACGAGGTCGTCAGACGGT-CAAGGCCCA 11026 Query 104882 GATGT-GTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTA 104940 || || |||| | || || || | | || ||||||||||| || || || |||||||| Sbjct 11025 GAAGTTGTGGTATGCGATCCTAGAAGCACAGACCGAGACTGGGACTCCTTATATGCTTTA 10966 Query 104941 CAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAA 105000 ||| || ||||| ||| | ||||| || || ||||| |||| ||| ||| ||||| Sbjct 10965 CAAGGATGCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGGACAATCCGGAGCTCCAA 10906 Query 105001 TCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC 105060 ||| || || ||||| | || | | | | |||||||| ||||| || || ||||| Sbjct 10905 TCTGTGCACGGAAATTGTCGAGTACAGTGCCCCAGATGAGATCGCTGTCTGCAATCTCGC 10846 Query 105061 ATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACT 105120 || | ||||| || | | || |||| || | || ||| | || || Sbjct 10845 CTCTCTGGCTCTTCCAACCTTCGTCGATCAAGCCCGAGGTGAATATGACTTTGGCCGTCT 10786 Query 105121 CCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTA 105180 || |||||||| || ||||| |||| | |||| | || |||| || | || Sbjct 10785 TCATGAAGTTACCCAAGTCGTCACTCGAAACTTGAACAAGATCATCGATATCAACTACTA 10726 Query 105181 CCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCA 105240 ||| || || | || || | ||||||| || ||||||| |||||||| Sbjct 10725 CCCTGTGCCCGAAGCCAGGAAGAGCAACTTCCGACACCGACCTGTTGGTCTTGGTGTTCA 10666 Query 105241 GGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGG 105299 |||||| || |||| ||| || ||||| || | | || || || || || Sbjct 10665 GGGTCTTGCAGATGCCTTCCTTGCTTTG-CGTCTTCCTTTCGACTCTCCAGAGGCCCGTC 10607 Query 105300 AAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGT 105359 || |||| | || || || ||||| || || || ||||| ||| | || Sbjct 10606 AACTCAACATCCAAATTTTCGAAACCATCTACCATGCAGCTCTGACTGCGTCATGCGAAC 10547 Query 105360 TGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGC 105419 | || ||| | ||||| ||||| |||| |||||| || | |||||||| | | Sbjct 10546 TCGCCAAGGAACAAGGTCCCTATGAGACCTATGAGGGCAGCCCGGTCTCACAAGGTATCC 10487 Query 105420 TTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA---CTA--CGACTGGGAAGCTCT 105474 |||| | |||||||| |||| || | | ||||| ||| || ||||| || | Sbjct 10486 TTCAGTATGATATGT-GGAATGTTACTC----CTTCAGATCTATGGGATTGGGATGCATT 10432 Query 105475 CAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAAC 105534 || | || | | ||| |||| ||| |||||| | || || ||||| || Sbjct 10431 GAAAGCTGAGATTGCTAAACATGGTGTTCGCAACTCTCTCCTTGTTGCCCCTATGCCTAC 10372 Query 105535 AGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACAT 105594 || |||||| | ||||||||||| || || |||||||| || || |||||| | ||||| Sbjct 10371 TGCATCCACCTCTCAAATCTTGGGCAACAACGAATGCTTCGAGCCATACACGTCCAACAT 10312 Query 105595 CTA 105597 ||| Sbjct 10311 CTA 10309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583254289351320