Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq151 203 4e-47 seq292 172 6e-38 seq56 138 1e-27 >seq151 Length=50061 Score = 203 bits (224), Expect = 4e-47 Identities = 181/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| |||||||||||||| || ||||||||||| ||||| | Sbjct 37033 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37092 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| ||||| | || || ||||||||||| || |||||||| ||||| Sbjct 37093 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37152 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| |||||||| || ||||||||||| || | || || || ||||| || Sbjct 37153 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37212 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||| ||||| |||||||| || ||| | ||||| || ||||| Sbjct 37213 ATCCAAAAAGAATCGACTCTTCACCTGGTCCTTCGTCTCCGTGGTGG 37259 Score = 129 bits (142), Expect = 7e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| | || |||||||| || || || || || || ||| Sbjct 37261 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37320 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | || | || ||||| |||||||| |||||||| || ||||| Sbjct 37321 GACACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAA 37380 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || || | || || ||||| || ||| | || || | ||| || || ||| |||||||| Sbjct 37381 CAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGC-GACTATAA 37439 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || ||||| ||||| ||| | || | || ||||| Sbjct 37440 CATCCAGAAGGAGTCGACTCTCCATCTCGTCCTCCGATTGCGAGGTGG 37487 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| | ||||| ||||||||||| | || ||||| || Sbjct 37489 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACTATTACGTTGGAAGTTGAATCTTCG 37548 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || || ||||| || ||||| ||||| || || || Sbjct 37549 GACACTATTGACAACGTCAAGTCAAAGATCCAGGATAAAGAGGGTATTCCACCGGATCAA 37608 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || ||||| || |||||| | || |||| || || || | ||||| ||| Sbjct 37609 CAGCGATTGATCTTTGCAGGCAAGCAATTGGAAGATGGACGCACTCTTTCTGACTACAAT 37668 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| |||||| ||| | || ||| | ||||| ||||| || Sbjct 37669 ATTCAGAAGGAGAGCACTCTGCATTTGGTGTTGAGACTTCGTGGTGGTCA 37718 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||| ||||| | |||| ||| | ||| | ||| | Sbjct 36829 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATGTAAAGTCC 36888 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || |||||||||||||| || |||||||| || || || ||||| ||||| || || || Sbjct 36889 AAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAA 36948 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || |||||||||| || ||| | || || || | || || ||||| || | ||| Sbjct 36949 CAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGCAT 37008 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 | ||| | || || || ||||| Sbjct 37009 TTGGTCCTTCGCCTCCGTGGTGG 37031 >seq292 Length=28646 Score = 172 bits (190), Expect = 6e-38 Identities = 647/1003 (65%), Gaps = 45/1003 (4%) Strand=Plus/Plus Query 80781 GGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAAC 80840 ||| || || | ||||| |||| ||||||||| ||||| ||| || || || || Sbjct 10710 GGCTTCGGGCACAGGGTAGTAGTTGATATCGATGATCTTGTTCAAGTTTCGAGTGACGAC 10769 Query 80841 CCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT---------TC-ACAA 80890 | ||||| |||||||| |||||| ||| | ||| || || | Sbjct 10770 TTGGGTAACTTCATGAAGACGGCCAAAGTCATATT----CACCTCGGGCTTGATCGACGA 10825 Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAG---CATCTGTAA 80947 | | ||||| ||| || || |||||||| || || | ||| || | || ||||| Sbjct 10826 AGGTTGGAAGAGCCAGAGAGGCGAGATTGCAGACAGCGATCTCATCTGGGGCA-CTGTA- 10883 Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 |||||| ||||||||||||| ||| || | ||||| |||||||| |||||||| Sbjct 10884 -CTCGACAATTTCCGTGCACAGATTGGAGCTCCGGATTGTCCCCAGGTTCTTCTGGTTGC 10942 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||| |||||| || |||||||| ||| || || || || |||||| ||||| | Sbjct 10943 TCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCAGTCTCGGTCTGTGCTT 11002 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCA 81127 ||||| || | ||| | || | ||||||||| || || | || || | Sbjct 11003 CTAGGATCGCATACCACAACTTCTGGGCCTTGACCGTCTGACGACCTCGTCCCTCTTTCT 11062 Query 81128 CATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACT 81187 |||||| | || | ||||| | | || | | |||| ||| | || || Sbjct 11063 CATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGGCCCGGTGCCT 11122 Query 81188 CGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAG 81247 | | ||| || | ||| |||||| || ||||| ||| ||||||| || | Sbjct 11123 CATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCCG 11182 Query 81248 GGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGC 81307 | |||| || || |||| ||| ||| ||| |||| || | || ||||| | Sbjct 11183 GAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTTC 11242 Query 81308 GCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACC 81367 || | || | || | || ||||| ||||||||||||||||| | ||| | | | Sbjct 11243 TCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCAC 11302 Query 81368 CCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCA 81421 | | |||| ||||||||||| || ||||||||||| ||| || ||||| | Sbjct 11303 C---GGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAA 11359 Query 81422 ACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGC 81481 ||| || |||| ||||| || ||||| || || | ||| || || | || | Sbjct 11360 GCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCAC 11419 Query 81482 GCACCTTGC--TGA---TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACA 81536 | | ||| ||| ||| || || || || || | ||| || ||| |||||| Sbjct 11420 GAA---TGCAATGAGCGTTG--AGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACA 11474 Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596 || | || || ||||||||||| ||||| || | ||||||||| | |||||| || Sbjct 11475 AGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCA 11534 Query 81597 GCTTGACATCTGAGGGCTTTTTGA--GCCGGCATTGAACAGTGTTGGGGTCGCGTGAATG 81654 |||| ||||| || || ||||||||||||||| ||||| | ||||| || Sbjct 11535 TGAGGACAATTGAGG--TTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTG 11592 Query 81655 AAATAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGAATATCGTCACCGTG 81713 || | | ||||| |||| ||||| || | | | | | || || || || || Sbjct 11593 AAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCG-ATGTCATCTCCATG 11651 Query 81714 AATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756 || || | || |||||||| | ||||| || || ||||| Sbjct 11652 GATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCG 11694 >seq56 Length=70628 Score = 138 bits (152), Expect = 1e-27 Identities = 287/422 (68%), Gaps = 8/422 (2%) Strand=Plus/Plus Query 31993 AAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATG 32052 |||||| ||||| ||||| || | ||| ||| |||| ||| || || || ||| Sbjct 37905 AAGCCTGGTCAGCGAAAGGTTATGTTCGCTTGCTTCAAACGAAACTTGAAGAAAGATATG 37964 Query 32053 AAGGTGGCGCAGCT-GTCGGGCTACGTGGCAGAGCAA--ACGGCCTATCACCACGGCGAG 32109 || || || | || | ||| || || | | | || ||||| ||||| ||||||||| Sbjct 37965 AAAGTCGCCGAACTCGCCGGTCT---TGTCGGTGGAATGACGGCTTATCATCACGGCGAG 38021 Query 32110 GCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTG 32169 |||||||||||| ||||| || || ||||| || |||||||| | || || | Sbjct 38022 GCGTCGCTCCAGCAGACCATCGTTGGTCTGGCTCAAAATTTTGTCGGATCCAACAATGTC 38081 Query 32170 AACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCG 32229 ||||| ||||||||||| || ||||| || || || || || | || |||| Sbjct 38082 AACTTGCTCGAGCCATCCGGCCAGTTCGGCACGCGAAATCAAGGAGGTAGCGACTCTGCT 38141 Query 32230 AGCTCCCGTTACATCTTCACCCGTCTCGC-ACCTTCGACGCGCAAGATTTTCGACCCGTC 32288 ||| | || || || ||||||||||| | |||||| | || ||| | ||| ||| | | Sbjct 38142 AGCGCTCGATATATTTTCACCCGTCTGTCTCCCTTCG-CCCGGAAGCTCTTCCACCAGGC 38200 Query 32289 GGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTA 32348 || || | | | | ||||| |||||||| || | |||| |||| ||| || Sbjct 38201 TGATGAACCTCTCTTGACTTACAACACTGATGACGACAAGAAGATCGAACCGGAGTTATA 38260 Query 32349 CAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGGGTTCAG 32408 || || |||| ||||| |||| || ||||| || || |||||||| || | || Sbjct 38261 TGTGCCAGTCGTTCCCATGATTCTGGTCAATGGTGCCGACGGTATCGGAACAGGCTGGAG 38320 Query 32409 TT 32410 || Sbjct 38321 TT 38322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570304033910160