Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq151 138 1e-27
seq82 84.2 2e-11
seq49 82.4 7e-11
>seq151
Length=50061
Score = 138 bits (152), Expect = 1e-27
Identities = 172/232 (74%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || |||| |||||| | || || || ||||||||| | ||
Sbjct 37261 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37320
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | || ||| || ||||||||||| ||||| || || || || |||
Sbjct 37321 GACACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAA 37380
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTC--CGATTACA 27165
|| || || || | ||| || |||||||| |||||| | |||| | | || ||| || |
Sbjct 37381 CAACGATTGATCTTCGCTGGAAAACAATTAGAAGAC-GGTCGAAC-TCTCAGCGACTATA 37438
Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||| || ||||||||||| | ||| | || | || ||||| ||||||||
Sbjct 37439 ACATCCAGAAGGAGTCGACTCTCCATCTCGTCCTCCGATTGCGAGGTGGCAT 37490
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || ||||||| ||| ||||||| | ||||| ||| | ||
Sbjct 37488 CATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACTATTACGTTGGAAGTTGAATCTTC 37547
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||| | ||||| ||| || || || ||||| || || ||||| |||||
Sbjct 37548 GGACACTATTGACAACGTCAAGTCAAAGATCCAGGATAAAGAGGGTATTCCACCGGATCA 37607
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| || || | || ||||| ||||||||||| | || |||| || |||||
Sbjct 37608 ACAGCGATTGATCTTTGCAGGCAAGCAATTGGAAGATGGACGCACTCTTTCTGACTACAA 37667
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| |||||| || | |||||||| ||| | | || |||||
Sbjct 37668 TATTCAGAAGGAGAGCACTCTGCATTTGGTGTTGAGACTTCGTGGTGG 37715
Score = 91.5 bits (100), Expect = 1e-13
Identities = 145/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069
||||||||||| | || || || || || || | ||| | || || | || ||
Sbjct 36827 TGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATGTAAAGT 36886
Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129
|| ||||| ||||| |||||||| || || |||||||| ||| | || | ||||||||
Sbjct 36887 CCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCA 36946
Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189
|||| | || || | ||| | |||||||||||||| || || || ||||| |
Sbjct 36947 AACAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGC 37006
Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||| | || | || ||||| ||
Sbjct 37007 ATTTGGTCCTTCGCCTCCGTGGTGGTAT 37034
>seq82
Length=64492
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || || || || |||||| | || || ||||| || || ||||||| | ||
Sbjct 45430 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACAATC 45371
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| || || ||||| || |||||||| || || || |||||||| ||
Sbjct 45370 GACAACGTCAAGTCCAAGATCCAAGATAAGGAAGGCATCCCCCCGGACCAACAGCGCTTG 45311
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | ||||||||| ||| | || || | || | ||||||||||| ||||||
Sbjct 45310 ATCTTCGCCGGCAAGCAACTTGAGGATGGCCGAACACTGAGTGATTACAACATCCAAAAG 45251
Query 27177 G 27177
|
Sbjct 45250 G 45250
>seq49
Length=72059
Score = 82.4 bits (90), Expect = 7e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139
|||||| |||||||| || || || || || || | || | ||||||||| ||| | ||
Sbjct 34693 AGACAAGGAAGGCATCCCTCCTGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTTGA 34634
Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199
||| | || | ||||| ||||||||||| |||||||| || || || |||| |
Sbjct 34633 AGATGGCCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCAACGTTGCACCTGGTCCT 34574
Query 27200 GCGTTTGCGGGGTGG 27214
||| ||||||| ||
Sbjct 34573 GCGCCTGCGGGGAGG 34559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434913545223360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |