Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq151 167 5e-36
seq82 125 2e-23
seq49 102 2e-16
seq292 86.0 1e-11
>seq151
Length=50061
Score = 167 bits (184), Expect = 5e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||||||||| || |||||||||||||| || || || || | || |||
Sbjct 37244 AGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCT 37185
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || |||||||| || || || || ||||||||||| ||||||| ||||||||||||
Sbjct 37184 TCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCC 37125
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || |||||||| || | || ||||| |||||||| |||
Sbjct 37124 TGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTC 37065
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| || || | |||||
Sbjct 37064 TTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37033
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| || || ||||| ||||| || ||||||||||| || || || | || |||
Sbjct 37472 AGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCT 37413
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| | || || || |||||||| | ||||||||||| || |||| ||||||||||||
Sbjct 37412 TCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCT 37353
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| ||| || || ||||| ||||| || ||| || || || ||||| |||
Sbjct 37352 TGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTC 37293
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| ||||| | |||||
Sbjct 37292 TTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37261
Score = 134 bits (148), Expect = 3e-26
Identities = 163/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||||||||| | || | || |||||| ||| || || || || || || | ||| ||
Sbjct 37710 ACGAAGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGT 37651
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||||||||| ||||||||||| ||||| | || ||||| || || |||| ||
Sbjct 37650 GCGTCCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACC 37591
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|| || |||||||||||| || ||||| || || ||||| || |||||| || |
Sbjct 37590 CTCTTTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAA 37531
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || |||||||| || | ||||| ||||| | ||||||
Sbjct 37530 CGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 37489
Score = 122 bits (134), Expect = 2e-22
Identities = 133/174 (76%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 210918 GTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
|| || ||||| || ||||| ||||| | ||||| | | ||||| || ||||| |||||
Sbjct 37001 GTAGATTCTTTCTGAATGTTGTAATCACTCAAGG-TGCGGCCATCCTCGAGCTGTTTGCC 36943
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
||||| || || |||||||| |||||||||| |||||||||||||| ||||| ||
Sbjct 36942 GGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGACTT 36883
Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || |||||||| || | || |||||||| ||||| ||||| || ||
Sbjct 36882 TACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 36829
>seq82
Length=64492
Score = 125 bits (138), Expect = 2e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
||||||||||| ||||| || || | ||||| || || |||||||| ||||||||
Sbjct 45252 TTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 45311
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
| ||| |||||||| || || | |||||||| || |||||||| || ||||| |||
Sbjct 45312 AAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCG 45371
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| || || || || ||||| || ||||| ||||| |||||||| ||||| || ||
Sbjct 45372 ATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 45430
>seq49
Length=72059
Score = 102 bits (112), Expect = 2e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| | || ||||| || || ||||| || || | || || | ||||||
Sbjct 34574 AGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCT 34633
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| || |||||||| |||||||| |||||||| ||||||||||| | |||||||||||
Sbjct 34634 TCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGGATGCCTTCCTTGTC 34692
>seq292
Length=28646
Score = 86.0 bits (94), Expect = 1e-11
Identities = 186/275 (68%), Gaps = 4/275 (1%)
Strand=Plus/Plus
Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTAC-GCAATGAAGGGCATTCCCA 178151
|||||| ||||||||||| || |||||| ||||| ||| |||| | |||||
Sbjct 10929 GTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGG--AGTCCCA 10986
Query 178152 C-CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTG 178210
||| | || || | || || || ||| | || |||||| ||| ||||
Sbjct 10987 GTCTCGGTCTGTGCTTCTAGGATCGCATACCACAACTTCTGGGCCTTGACCGTCTGACGA 11046
Query 178211 GCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCA 178270
|| ||| || ||||| |||| || ||||| | ||||||||| ||||||||||||
Sbjct 11047 CCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCA 11106
Query 178271 TCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGT 178330
| || || || ||||||| || ||||| ||| |||| | || | || || |||
Sbjct 11107 GCAAGGCCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGT 11166
Query 178331 TTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
||||||| || || | ||||| | ||||| ||
Sbjct 11167 CTCATGAATAGATCCGGAGTCCAAAGTGCATAAAA 11201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159138737489945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |