Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq151 109 4e-19
>seq151
Length=50061
Score = 109 bits (120), Expect = 4e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||| | || ||||| || || || | |||||||| || ||
Sbjct 37489 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACTATTACGTTGGAAGTTGAATCTTCG 37548
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| |||| | | || ||| || || ||||| ||| | || || ||||||
Sbjct 37549 GACACTATTGACAACGTCAAGTCAAAGATCCAGGATAAAGAGGGTATTCCACCGGATCAA 37608
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| || || ||||| ||||| ||| ||||||| | ||||||| | || |||||
Sbjct 37609 CAGCGATTGATCTTTGCAGGCAAGCAATTGGAAGATGGACGCACTCTTTCTGACTACAAT 37668
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
|| || || ||| ||| | ||||| || || ||
Sbjct 37669 ATTCAGAAGGAGAGCACTCTGCATTTGGTGTTGAG 37703
Score = 107 bits (118), Expect = 1e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || || || || || || || |||||||| || || || ||||
Sbjct 37033 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37092
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || ||| | || | || | | ||||| |||||| | || || || ||
Sbjct 37093 GATACCATCGACAATGTGAAGTCCAAGA-TCCAGGACAAGGAAGGTATTCCTCCCGACCA 37151
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| ||| | || ||||||||||| ||||| ||||||| |||||| | | || |||||
Sbjct 37152 ACAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAA 37211
Query 23790 CATACAAAAAGAGTCCAC 23807
||| |||||||| || ||
Sbjct 37212 CATCCAAAAAGAATCGAC 37229
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 23635 ACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAATATTAAAACAA 23694
|| || || || ||||| ||||| || || |||| || || | || | ||||
Sbjct 36829 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATGTAAAGTCC 36888
Query 23695 AAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAA 23754
|| ||| ||||| ||||| | || || |||||||| ||| | || || |||||||||
Sbjct 36889 AAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAA 36948
Query 23755 CAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACAT 23814
|| || || || | ||||| || | ||||||||||| || ||||| || || || |||
Sbjct 36949 CAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGCAT 37008
Query 23815 TTAGT 23819
|| ||
Sbjct 37009 TTGGT 37013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338005921293644
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |