Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq151 158 3e-33
seq341 118 3e-21
seq82 102 2e-16
seq49 95.1 3e-14
>seq151
Length=50061
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| || |||||||| || || || |||| || || ||| | ||||| || |||
Sbjct 37472 AGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCT 37413
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|||| || || ||||||||||| | |||||||||||| |||||||| ||||||||||||
Sbjct 37412 TCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCT 37353
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| || ||| ||||| |||||||| | |||||| || | ||||| |||
Sbjct 37352 TGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTC 37293
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| || || | || | ||||||
Sbjct 37292 TTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37261
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| ||||| ||||||||||||| ||||| || | ||| | || |||
Sbjct 37244 AGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCT 37185
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || || || || || |||||||||||||| |||||||||||||||||
Sbjct 37184 TCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCC 37125
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| |||||||| || || || || || | ||||| |||
Sbjct 37124 TGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTC 37065
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||| || | ||| | ||||||
Sbjct 37064 TTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37033
Score = 113 bits (124), Expect = 1e-19
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| || | || |||||| || || || | |||||| || | | |||
Sbjct 37710 ACGAAGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGT 37651
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| | ||||| || || ||||| | ||| ||||| || || ||||||||
Sbjct 37650 GCGTCCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACC 37591
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|| || || ||||||||| ||| || || || ||||| || | ||| || || ||
Sbjct 37590 CTCTTTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAA 37531
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
||| || ||||| || ||||| || ||
Sbjct 37530 CGTAATAGTCTTTCCGGTCAAGGTCTT 37504
Score = 109 bits (120), Expect = 1e-18
Identities = 129/175 (74%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| |||||||| || | |||||||| ||| || | ||||| || ||||| || ||
Sbjct 37001 GTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCATCCTCGAGCTGTTTGCCG 36942
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
||||| || || |||||||| || || ||||| ||||||||||| || ||||| |||
Sbjct 36941 GCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGACTTT 36882
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCA 225691
||| |||||||| || || || || || | ||||| |||||||| ||||
Sbjct 36881 ACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCA 36827
>seq341
Length=23579
Score = 118 bits (130), Expect = 3e-21
Identities = 190/271 (70%), Gaps = 3/271 (1%)
Strand=Plus/Minus
Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499
||| ||||||||||| ||| || ||||| || | || || || || | |
Sbjct 16404 AACTTTATATTTAATGTTTTCTGTTTTTTCAGGGTTAGCTGGAACAGCTTTCTCAGTATT 16345
Query 7500 TATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTA 7559
||||| ||||||||| | | || ||| ||| ||| || | ||| ||| | ||
Sbjct 16344 AATAAGATTAGAATTATCAGGGCCTGGTGTACAA-TATATAGCAG--ATAATCAATTATA 16288
Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619
||| ||| ||||| || || || | |||||||| |||||| | |||||||| | | |
Sbjct 16287 TAACAGTATAATTACAGCACACGCTATAGTTATGATATTCTTTATGGTTATGCCTGCTCT 16228
Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679
||||| ||||| || |||| | | || ||| | | |||| ||| |||||||| ||
Sbjct 16227 AATAGGAGGTTTTGGTAATTTTCTATTACCATTACTAGTAGGTGGTCCAGATATGGCATT 16168
Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTA 7710
||| || || |||||||||||||||||||||
Sbjct 16167 TCCTAGACTAAACAATATAAGTTTTTGATTA 16137
Score = 89.7 bits (98), Expect = 1e-12
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424
|||| ||||||||| | || |||||| ||||||||| ||||| |||||||||||
Sbjct 15901 AATGCTAATTTATGAAGTCTTATACCAGGACTTCTCATATTTAATATTGTAGTAATAAAA 15960
Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484
|| ||||| || || | | | |||||||| ||| |||| | |||||| ||||||||
Sbjct 15961 TTCATAGCTCCGAGCAAACTACTTATACCTGAAAGGTGTAGAGCAAATATGGCTAAATCT 16020
Query 371485 AC 371486
||
Sbjct 16021 AC 16022
>seq82
Length=64492
Score = 102 bits (112), Expect = 2e-16
Identities = 121/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
||||||| |||||||| || |||| ||||| || || ||||| || ||||||||
Sbjct 45252 TTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 45311
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
| || |||||||| || || || |||||||| ||||||||||| ||| || |||
Sbjct 45312 AAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCG 45371
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| || || || | || || || | ||||| |||||||||||
Sbjct 45372 ATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 45415
>seq49
Length=72059
Score = 95.1 bits (104), Expect = 3e-14
Identities = 102/134 (76%), Gaps = 1/134 (1%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | |||||| ||||| | || || || || || | ||||| |||| || |||
Sbjct 34565 CGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGACAGAGTG 34624
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| |||||||| || ||||| || |||||||| || ||||| ||||| || || || |||
Sbjct 34625 CGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGGATGCCT 34684
Query 225613 TCCTTGTCT-TGGA 225625
||||||||| ||||
Sbjct 34685 TCCTTGTCTGTGGA 34698
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192517555579742
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |