Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq151 172 1e-37
seq82 138 2e-27
seq56 116 8e-21
seq49 105 1e-17
seq5 91.5 3e-13
seq201 89.7 1e-12
>seq151
Length=50061
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| ||||| || | || ||||||||||||||||||||||
Sbjct 37260 ACCACCACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACT 37201
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| || || ||||| || |||||||| || | |||||||||||| ||
Sbjct 37200 GAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGG 37141
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||| |||||||| |||||||| | || || | ||||| || || | |||||
Sbjct 37140 AATACCTTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGAC 37081
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| |||||||| ||||| || || | |||||| ||||| || |||||
Sbjct 37080 CTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37033
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || | | |||| ||| | ||||| || || || || ||||||||||
Sbjct 37716 ACCACCACGAAGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGA 37657
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| ||||| || | ||| || || ||||||||||| || ||||| || ||
Sbjct 37656 AAGAGTGCGTCCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGG 37597
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||| || || |||||||||| || ||| | || ||||||||||||| ||| ||
Sbjct 37596 AATACCCTCTTTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAAC 37537
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | || || ||||| || ||||| ||||| || || ||||||||
Sbjct 37536 TTCCAACGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 37489
Score = 158 bits (174), Expect = 3e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| |||| || || || ||||| | || || || |||||||| |||||
Sbjct 37487 CCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTG 37428
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || || || |||| |||||| || || |||||||| ||||||||||| ||||
Sbjct 37427 AGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGA 37368
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || ||||||||||| ||||| | |||||| | ||||| ||||| || | ||| |||
Sbjct 37367 ATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACT 37308
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || ||||| ||||| || || || |||||
Sbjct 37307 TCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37261
Score = 150 bits (166), Expect = 4e-31
Identities = 159/207 (77%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930
||||||||| |||||||| |||| ||| || || |||||| || |||||||| |||
Sbjct 37032 ACCACCACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACT 36973
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|||| |||||||||||||| || ||||| ||||| || || | ||||||||| ||| |
Sbjct 36972 CAAG-GTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAG 36914
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|||| || |||||||| || ||||| | ||||| | ||||| || || | ||||
Sbjct 36913 GAATGCCTTCCTTGTCCTGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGA 36854
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077
| ||||| ||||| ||||| || ||||
Sbjct 36853 CCTCGAGGGTGATGGTCTTGCCGGTCA 36827
>seq82
Length=64492
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|||||||||||||| ||| || || ||||||||||| ||||| || ||||| ||||||
Sbjct 45252 TTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 45311
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
|| || |||||||| || || || ||||| ||||||||||| | || ||| | |||
Sbjct 45312 AAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCG 45371
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| || || || | ||||| || || ||||| ||||| ||||| | ||||| |||||
Sbjct 45372 ATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 45430
>seq56
Length=70628
Score = 116 bits (128), Expect = 8e-21
Identities = 256/371 (69%), Gaps = 12/371 (3%)
Strand=Plus/Minus
Query 274431 ACGATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAAAC-A 274489
||||| || |||||||||| | || ||| |||||||| ||||||||||| || |
Sbjct 37492 ACGATCGGGGTGATAAATTCCACCAAGAACTTTGGAATTTGGAGCAGACTGGGAAATTGA 37433
Query 274490 ACTATGGAAAAAGTTCATGA-CAAGACCTGATATGTGAGTTCCGTCAACGTCGGCATCTG 274548
||| || || || || || | |||| | | | |||||| |||| ||| || |||||
Sbjct 37432 ACT-TGCAAGAAATTAATCAACAAGCCTTTA-ATGTGACTTCCATCATGATCCTGATCTG 37375
Query 274549 TCATGATCATAACATGTCCATACCGAAG--CGAGGAAGTATCTTTATACAACTTCCCTGT 274606
|||||||||| | |||||||| ||||| || || ||||| | || |||| | |||
Sbjct 37374 TCATGATCATCAAGTGTCCATAGCGAAGGCCGTGG--GTATCGGTGTA-GACTTTCTTGT 37318
Query 274607 -TTGAAGCCCAAGAATTTGCTTGA-GAGCGGTGATTTCTTCGTTCTTTGTGATACTCGCC 274664
|| || || || | | |||| | | | || || ||||||||| ||| |
Sbjct 37317 GCTGGAGACCGAGGAAGTTTTTGATGTTCTG-AATCTCGGCGTTCTTTGAGATCTGATCA 37259
Query 274665 ACAGAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCATACCTTTCG 274724
|| || || || || || |||| | |||||||| || || || |||||| || |||
Sbjct 37258 ACTGATGCGTCTCGGACATTCAAAAGTTTACCGCGCAGGGGAAAGACGCCAAACAAATCG 37199
Query 274725 CGCCCGATGACCGAAAGACCGGCGATCGCGAGAGTTGCTGCTGAATCTCCCTCTGTGAGA 274784
| || | |||||| | ||||| || || ||| | || ||||||||||| || ||
Sbjct 37198 GGACCAACGACCGATCGTCCGGCCATTGCAAGACCTTTGGCAGAATCTCCCTCAGTCAGT 37139
Query 274785 ATCAAAGTACA 274795
||||| || ||
Sbjct 37138 ATCAAGGTGCA 37128
>seq49
Length=72059
Score = 105 bits (116), Expect = 1e-17
Identities = 108/140 (77%), Gaps = 1/140 (1%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| || |||||||| || ||||| || ||||| || || || ||||||||||| |
Sbjct 34559 CCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGAC 34618
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||||||||| || ||||| || ||||| ||||||| ||||| |||||| ||
Sbjct 34619 AGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGG 34678
Query 282993 ATACCCTCCTTGTCT-TGGA 283011
|| || ||||||||| ||||
Sbjct 34679 ATGCCTTCCTTGTCTGTGGA 34698
>seq5
Length=88410
Score = 91.5 bits (100), Expect = 3e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 315664 ACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCC 315723
|| || ||||| | || | ||| || |||| | || || || || || |||||
Sbjct 50371 ACTACACCACCCTCAAACTCCTTGAGAGCCTTGGACAGAGCGCCCAGCGAGTCCCGGTCA 50430
Query 315724 ACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGCG-GCGCC 315782
| |||||||||| ||||| |||||||| | ||| || |||||||| | || || |
Sbjct 50431 AGGTAGTTGGTCGGTTCATCGAGAACGATCAAGTGAGGACGTTGCCAT-GTGCAAGCAGC 50489
Query 315783 GATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATGAGTGGTAAA 315842
|| ||||| ||| | |||||||||||||| ||||| |||||||| |||| | | |
Sbjct 50490 GAGAACGACCTTGACACGCTGCCCACCAGACAGACCACGCATGCGAGAGTGAGAGATGAG 50549
Query 315843 TTCTGGGTCAAGGCCAACATTAGC 315866
||| | ||| || || | ||| ||
Sbjct 50550 TTCCGCGTCGAGACCGAAATTGGC 50573
>seq201
Length=168916
Score = 89.7 bits (98), Expect = 1e-12
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 230229 GGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTG 230288
|||||||| || | || ||| |||||||| || ||||| || || ||| || || |
Sbjct 77821 GGCATGAACGCCAAACTGATGCAACAATATATTGAGTTCGTTGCCGACCGTCTTCTCCTT 77762
Query 230289 GCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATT 230348
|| || || || |||| || || || |||| || ||| |||||||| |||
Sbjct 77761 GCCCTCGGAAACAAGAAGTACTACAATGCCCAGAATCCTTTCAGCTTTATGGACAACATC 77702
Query 230349 TCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGT 230408
||| | ||| || || ||||||||||| ||||||||| | ||||| || | | |||||
Sbjct 77701 TCATTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTGTCGGTGATTACCAGAAGACCGGT 77642
Query 230409 GT 230410
||
Sbjct 77641 GT 77640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046727223668022
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