Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq151 172 1e-37 seq82 138 2e-27 seq56 116 8e-21 seq49 105 1e-17 seq5 91.5 3e-13 seq201 89.7 1e-12 >seq151 Length=50061 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| ||||| || | || |||||||||||||||||||||| Sbjct 37260 ACCACCACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACT 37201 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| || || ||||| || |||||||| || | |||||||||||| || Sbjct 37200 GAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGG 37141 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| |||||||| |||||||| | || || | ||||| || || | ||||| Sbjct 37140 AATACCTTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGAC 37081 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | |||||| ||||| || ||||| Sbjct 37080 CTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37033 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | | |||| ||| | ||||| || || || || |||||||||| Sbjct 37716 ACCACCACGAAGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGA 37657 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || | ||| || || ||||||||||| || ||||| || || Sbjct 37656 AAGAGTGCGTCCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGG 37597 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||| || || |||||||||| || ||| | || ||||||||||||| ||| || Sbjct 37596 AATACCCTCTTTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAAC 37537 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || ||||| || ||||| ||||| || || |||||||| Sbjct 37536 TTCCAACGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 37489 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| |||| || || || ||||| | || || || |||||||| ||||| Sbjct 37487 CCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTG 37428 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || || |||| |||||| || || |||||||| ||||||||||| |||| Sbjct 37427 AGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGA 37368 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||| ||||| | |||||| | ||||| ||||| || | ||| ||| Sbjct 37367 ATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACT 37308 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || ||||| ||||| || || || ||||| Sbjct 37307 TCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37261 Score = 150 bits (166), Expect = 4e-31 Identities = 159/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| |||||||| |||| ||| || || |||||| || |||||||| ||| Sbjct 37032 ACCACCACGGAGGCGAAGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACT 36973 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| |||||||||||||| || ||||| ||||| || || | ||||||||| ||| | Sbjct 36972 CAAG-GTGCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAG 36914 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| || |||||||| || ||||| | ||||| | ||||| || || | |||| Sbjct 36913 GAATGCCTTCCTTGTCCTGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGA 36854 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077 | ||||| ||||| ||||| || |||| Sbjct 36853 CCTCGAGGGTGATGGTCTTGCCGGTCA 36827 >seq82 Length=64492 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 |||||||||||||| ||| || || ||||||||||| ||||| || ||||| |||||| Sbjct 45252 TTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 45311 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 || || |||||||| || || || ||||| ||||||||||| | || ||| | ||| Sbjct 45312 AAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCG 45371 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || || || || | ||||| || || ||||| ||||| ||||| | ||||| ||||| Sbjct 45372 ATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 45430 >seq56 Length=70628 Score = 116 bits (128), Expect = 8e-21 Identities = 256/371 (69%), Gaps = 12/371 (3%) Strand=Plus/Minus Query 274431 ACGATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAAAC-A 274489 ||||| || |||||||||| | || ||| |||||||| ||||||||||| || | Sbjct 37492 ACGATCGGGGTGATAAATTCCACCAAGAACTTTGGAATTTGGAGCAGACTGGGAAATTGA 37433 Query 274490 ACTATGGAAAAAGTTCATGA-CAAGACCTGATATGTGAGTTCCGTCAACGTCGGCATCTG 274548 ||| || || || || || | |||| | | | |||||| |||| ||| || ||||| Sbjct 37432 ACT-TGCAAGAAATTAATCAACAAGCCTTTA-ATGTGACTTCCATCATGATCCTGATCTG 37375 Query 274549 TCATGATCATAACATGTCCATACCGAAG--CGAGGAAGTATCTTTATACAACTTCCCTGT 274606 |||||||||| | |||||||| ||||| || || ||||| | || |||| | ||| Sbjct 37374 TCATGATCATCAAGTGTCCATAGCGAAGGCCGTGG--GTATCGGTGTA-GACTTTCTTGT 37318 Query 274607 -TTGAAGCCCAAGAATTTGCTTGA-GAGCGGTGATTTCTTCGTTCTTTGTGATACTCGCC 274664 || || || || | | |||| | | | || || ||||||||| ||| | Sbjct 37317 GCTGGAGACCGAGGAAGTTTTTGATGTTCTG-AATCTCGGCGTTCTTTGAGATCTGATCA 37259 Query 274665 ACAGAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCATACCTTTCG 274724 || || || || || || |||| | |||||||| || || || |||||| || ||| Sbjct 37258 ACTGATGCGTCTCGGACATTCAAAAGTTTACCGCGCAGGGGAAAGACGCCAAACAAATCG 37199 Query 274725 CGCCCGATGACCGAAAGACCGGCGATCGCGAGAGTTGCTGCTGAATCTCCCTCTGTGAGA 274784 | || | |||||| | ||||| || || ||| | || ||||||||||| || || Sbjct 37198 GGACCAACGACCGATCGTCCGGCCATTGCAAGACCTTTGGCAGAATCTCCCTCAGTCAGT 37139 Query 274785 ATCAAAGTACA 274795 ||||| || || Sbjct 37138 ATCAAGGTGCA 37128 >seq49 Length=72059 Score = 105 bits (116), Expect = 1e-17 Identities = 108/140 (77%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || |||||||| || ||||| || ||||| || || || ||||||||||| | Sbjct 34559 CCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGAC 34618 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || ||||| || ||||| ||||||| ||||| |||||| || Sbjct 34619 AGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGG 34678 Query 282993 ATACCCTCCTTGTCT-TGGA 283011 || || ||||||||| |||| Sbjct 34679 ATGCCTTCCTTGTCTGTGGA 34698 >seq5 Length=88410 Score = 91.5 bits (100), Expect = 3e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 315664 ACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCC 315723 || || ||||| | || | ||| || |||| | || || || || || ||||| Sbjct 50371 ACTACACCACCCTCAAACTCCTTGAGAGCCTTGGACAGAGCGCCCAGCGAGTCCCGGTCA 50430 Query 315724 ACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGCG-GCGCC 315782 | |||||||||| ||||| |||||||| | ||| || |||||||| | || || | Sbjct 50431 AGGTAGTTGGTCGGTTCATCGAGAACGATCAAGTGAGGACGTTGCCAT-GTGCAAGCAGC 50489 Query 315783 GATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATGAGTGGTAAA 315842 || ||||| ||| | |||||||||||||| ||||| |||||||| |||| | | | Sbjct 50490 GAGAACGACCTTGACACGCTGCCCACCAGACAGACCACGCATGCGAGAGTGAGAGATGAG 50549 Query 315843 TTCTGGGTCAAGGCCAACATTAGC 315866 ||| | ||| || || | ||| || Sbjct 50550 TTCCGCGTCGAGACCGAAATTGGC 50573 >seq201 Length=168916 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 230229 GGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTG 230288 |||||||| || | || ||| |||||||| || ||||| || || ||| || || | Sbjct 77821 GGCATGAACGCCAAACTGATGCAACAATATATTGAGTTCGTTGCCGACCGTCTTCTCCTT 77762 Query 230289 GCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATT 230348 || || || || |||| || || || |||| || ||| |||||||| ||| Sbjct 77761 GCCCTCGGAAACAAGAAGTACTACAATGCCCAGAATCCTTTCAGCTTTATGGACAACATC 77702 Query 230349 TCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGT 230408 ||| | ||| || || ||||||||||| ||||||||| | ||||| || | | ||||| Sbjct 77701 TCATTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTGTCGGTGATTACCAGAAGACCGGT 77642 Query 230409 GT 230410 || Sbjct 77641 GT 77640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046727223668022