Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq151 129 4e-25 seq82 96.9 2e-15 >seq151 Length=50061 Score = 129 bits (142), Expect = 4e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||||| || || ||||||||||| || || ||||| || | || ||| Sbjct 37706 AGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGT 37647 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || |||| ||||| || ||||||||||| ||||| ||||| | || | ||| || Sbjct 37646 CCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCT 37587 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | | | || ||||| | ||||| || |||| |||| Sbjct 37586 TTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTA 37527 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||||||| || | |||||| || ||||| |||||| Sbjct 37526 ATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATG 37488 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||||||||| || || |||||||||||||| || ||| ||| |||| || Sbjct 37241 ACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCG 37182 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| |||||||| || | ||| || || || | ||| | ||||||||| ||| Sbjct 37181 AGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGG 37122 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | ||||| ||| ||| || ||||| | || || ||||| Sbjct 37121 ATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTG 37062 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| |||||||||||||| Sbjct 37061 CCGGTAAGAGTCTTGACGAAGATTTGCAT 37033 Score = 89.7 bits (98), Expect = 4e-13 Identities = 163/235 (69%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| || || | || || || || || |||||| |||||||| || || Sbjct 37491 CATGCCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTC 37432 Query 44167 G--GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | | ||||| || |||| || | || || || || |||||||| || || || || Sbjct 37431 GCTGAGAGTT--CGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCC 37374 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGG 44282 | || | |||||||| || |||||| || || ||| | || ||||| | | Sbjct 37373 GGCGGAATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGT--CGATCGTGTCTGATG 37316 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| |||| || || ||||| || || | |||||| || ||||||||||| Sbjct 37315 ATTCCACTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37261 >seq82 Length=64492 Score = 96.9 bits (106), Expect = 2e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 ||||||||||||||||||| ||| || | || || || ||||| ||||| |||| Sbjct 45250 CCTTTTGGATGTTGTAATCACTCAGTGTTCGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 45309 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 |||| ||||| || || | || | |||||||| || ||||| ||| | | Sbjct 45310 TCAAGCGCTGTTGGTCCGGGGGGATGCCTTCCTTATCTTGGATCTTGGACTTGACGTTGT 45369 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | || || |||| || || ||||| | || || ||||| |||||||||||||| |||| Sbjct 45370 CGATTGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 45429 Query 44328 AGATTTGC 44335 || | ||| Sbjct 45430 AGCTGTGC 45437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359986482066981