Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016-
09-12] 893 sequences; 32,602,137 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq151 129 1e-24
seq82 111 4e-19
seq49 96.9 8e-15
seq292 87.8 4e-12
>seq151
Length=50061
Score = 129 bits (142), Expect = 1e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || ||||| || || || || ||||| || ||||| || | ||
Sbjct 37036 CAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGAT 37095
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| |||||||| ||||| || ||||| ||||| |||
Sbjct 37096 ACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAACAA 37155
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || || ||||| || || |||||||| || | ||||| || || ||| ||
Sbjct 37156 CGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAACATC 37215
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||||||||| || || || || ||
Sbjct 37216 CAAAAAGAATCGACTCTTCACCTGGT 37241
Score = 122 bits (134), Expect = 2e-22
Identities = 137/181 (76%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || |||||||||||||| || | || |||||||| || || ||
Sbjct 36829 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATGTAAAGTCC 36888
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|||||||||||||| ||||| || ||||| || || ||||| || || |||||||| |||
Sbjct 36889 AAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAA 36948
Query 178065 CAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123
|||||||| ||||| | || |||| ||||| ||| | || |||||||| || ||||
Sbjct 36949 CAGCTCGAGGATGGCCGCAC-CTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGCA 37007
Query 178124 T 178124
|
Sbjct 37008 T 37008
>seq82
Length=64492
Score = 111 bits (122), Expect = 4e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || ||||| || || || |||||||| ||||| || || || || |||
Sbjct 45430 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACAATC 45371
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| |||||||| ||||| || || || ||||| ||||| |||||||| || || |
Sbjct 45370 GACAACGTCAAGTCCAAGATCCAAGATAAGGAAGGCATCCCCCCGGACCAACAGCGCTTG 45311
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||||||||| || || || || ||||| | || || ||||| ||| |||||||
Sbjct 45310 ATCTTCGCCGGCAAGCAACTTGAGGATGGCCGAACACTGAGTGATTACAACATCCAAAA 45252
>seq49
Length=72059
Score = 96.9 bits (106), Expect = 8e-15
Identities = 91/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| ||||| |||||||| ||||||||||| || ||||||||||| || || || |||
Sbjct 34692 GACAAGGAAGGCATCCCTCCTGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTTGAA 34633
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
||||| | ||||| |||| || ||| | || || || ||||| |||| || ||
Sbjct 34632 GATGGCCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCAACGTTGCACCTGGT 34577
>seq292
Length=28646
Score = 87.8 bits (96), Expect = 4e-12
Identities = 192/284 (68%), Gaps = 8/284 (3%)
Strand=Plus/Plus
Query 214121 TCCCAAAGTTTTTCTGGTTGC---TTTTGCGGCAAATGGCATCTTTGTATGCGATGAAAG 214177
|||| | ||| |||||||||| | ||| ||| |||||| ||||| || |||
Sbjct 10922 TCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCA---GGCATCCTTGTAAAGCATATAAG 10978
Query 214178 GCATTCCCA-CCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACG 214236
| | ||||| |||| || || | || || || ||| | | |||||||| ||
Sbjct 10979 G-AGTCCCAGTCTCGGTCTGTGCTTCTAGGATCGCATACCACAACTTCTGGGCCTTGACC 11037
Query 214237 ACCTTTTTGGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCG 214296
|| ||| |||||| || || |||| |||||| || | || |||||| ||
Sbjct 11038 GTCTGACGACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCA 11097
Query 214297 TAGACATCATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCC 214356
||||||||| |||| || || ||||| | || ||||| ||| |||| | | || | |
Sbjct 11098 TAGACATCAGCAAGGCCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTC 11157
Query 214357 CTGACTCTTTTCATGAAAAGGTCGGAAGTCCAGATTGCATAAAA 214400
||| | | ||||||| || || | |||||| | |||||||||
Sbjct 11158 TCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAA 11201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203717427434242
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |