Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq73 181 1e-40
>seq73
Length=89549
Score = 181 bits (200), Expect = 1e-40
Identities = 559/857 (65%), Gaps = 6/857 (1%)
Strand=Plus/Minus
Query 53990 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 54049
|||| ||||| | || | ||| ||| || | || || ||| |||| || |||||
Sbjct 17429 TCATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATGAATAGATCC 17370
Query 54050 GGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 54109
||| ||||||| || ||| | || | || | | || || ||||| ||||||
Sbjct 17369 GGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCGTGGTTCTTT 17310
Query 54110 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACT 54169
| || | || | | | | ||| | ||||| || |||| || |||| | |
Sbjct 17309 CTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATGGCAAAGGCA 17250
Query 54170 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 54229
|| || || || || || ||||| || | || | || ||||| || | || | | |
Sbjct 17249 CCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAGACACGAAGC 17190
Query 54230 ATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGA 54289
|| ||||| | ||||||||| | || |||||||||| |||||| ||| | ||||||
Sbjct 17189 ATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCAGTAGCACGA 17130
Query 54290 ATATTACTAATTGAT-AGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 54348
|| | | | | | || || || || || || | || ||||| | || || ||
Sbjct 17129 ATGCAA-TGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTT 17071
Query 54349 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 54408
| || || || || ||||| || || || || |||||| | | || || ||
Sbjct 17070 GAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGA 17011
Query 54409 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 54468
|| ||| | | ||| || ||||| || | || ||||| ||||| || || || ||
Sbjct 17010 CAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTT 16951
Query 54469 TTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 54528
| || | || ||||| ||||| || || || || || | ||| || || ||
Sbjct 16950 CTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAAC 16891
Query 54529 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT-GTTTATTTTCAGCA 54587
||| |||||||| | |||||| || ||||| || | | |||||| | || || ||||
Sbjct 16890 TGCCACACGCATGAGCATGTGTTGCGGTCTCTCGGCCA-CTTGTTTGCCAATCTTGAGCA 16832
Query 54588 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 54647
|| ||| |||||||||| || || || || || | ||| |||||||| |||||||
Sbjct 16831 GATATGATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCGTAAA 16772
Query 54648 TAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAA- 54706
|| | ||||| || | ||| || | | |||| |||| ||| | || | |
Sbjct 16771 CGATGGCCGAGTTCAGCTCATCAGCATGTCTCATAAC-ACATTCATACGTCTCCTGGGAG 16713
Query 54707 ATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACT 54766
|| |||||||| || ||| || || || |||| ||||| | | |||| || |||
Sbjct 16712 ATCATCGGAGAGTGCTTCTTGTTCTTGGGGTTGATATAGTAGTAGAGATCCGACACCACC 16653
Query 54767 TCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGA 54826
| ||| |||| || || | ||||| ||||| || ||||| || | || || ||
Sbjct 16652 GAAGAGAATTGTTTCTTAGTCTGCTTGTGGAGATTGGACACGGCGATACGCGCTGCGAGG 16593
Query 54827 ATGGCATAATCCGGATG 54843
||||||||||| |||||
Sbjct 16592 ATGGCATAATCGGGATG 16576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593710653258000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |