Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq883 95.1 1e-14
>seq883
Length=160511
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| ||||||| | ||| || | ||| | ||| |||||||| || |||||||||||
Sbjct 38142 CCACCTCGCAATCGGAGGACGAGATGGAGAGTCGACTCCTTCTGGATGTTATAGTCGCTG 38083
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| | |||| || | ||||| || || | || | || || |||||| ||
Sbjct 38082 AGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAAGATCAATCGTTGTTGGTCCGGCGGA 38023
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| ||||| ||| || | | ||| || || | ||| |
Sbjct 38022 ATTCCTTCCTTGTCTTGAATCTTCGATTTTACATTGTCGATCGTGTCTGATGATTCCACT 37963
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || ||||||||||| || || || |||||||| ||||||||
Sbjct 37962 TCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 37916
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
|| |||| || | ||| || || ||||| ||||| ||||| || || || ||||
Sbjct 37899 AGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCT 37840
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| || || ||||| ||| |||| || | || ||||| || | |||||||||||
Sbjct 37839 TCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCC 37780
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| ||||| | | ||| ||||| | || ||| || | || ||||||
Sbjct 37779 TGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTC 37720
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| | || ||||| || ||||||||
Sbjct 37719 TTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688
Score = 82.4 bits (90), Expect = 6e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
|| |||| |||||| || || || || |||||||| || || || ||| || | |||
Sbjct 37671 AGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCATCC 37612
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||||||||| || |||| || | || || || || | ||||||||||||
Sbjct 37611 TCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCC 37552
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||||| || || | | ||| ||||| | || ||| || | ||| ||||||
Sbjct 37551 TGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTC 37492
Query 21144 TTGCCGGT 21151
||||||||
Sbjct 37491 TTGCCGGT 37484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422251609231100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |