Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq256 102 8e-17
seq883 100 3e-16
seq377 98.7 1e-15
seq1350 91.5 2e-13
>seq256
Length=205955
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| || |||||||| | ||||||||||| || |||| ||| ||||| || || ||
Sbjct 110689 GACAAGGAAGGCATCCCTCCTGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTTGAA 110748
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|| | ||||| || |||||||||||| ||||||||| | ||| |||| || || ||
Sbjct 110749 GATGGCCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCAACGTTGCACCTGGTCCTG 110808
Query 40903 CGCTTGAGGGGCGG 40916
||| || |||| ||
Sbjct 110809 CGCCTGCGGGGAGG 110822
>seq883
Length=160511
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || | || ||||| |||||||| | || || ||| | |
Sbjct 37916 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37975
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | || || |||| ||||| || || || || |||||||
Sbjct 37976 GACACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAA 38035
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|||||| | |||| ||| || ||||| | || |||| || || |||| |||||| |||
Sbjct 38036 CAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGCGACTATAAC 38095
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| | || || ||||| || | || ||| | || |||
Sbjct 38096 ATCCAGAAGGAGTCGACTCTCCATCTCGTCCTCCGATTGCGAGGTGGC 38143
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| |||||||| | || ||||| ||| |
Sbjct 37688 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37747
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | ||| || || | ||||| || || || || | |||||
Sbjct 37748 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37807
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| ||||| | || ||||| || || || |||| ||||| |||| |||||||||
Sbjct 37808 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37867
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||| || || | || || || || ||
Sbjct 37868 ATCCAAAAAGAATCGACTCTTCACCTGGT 37896
Score = 91.5 bits (100), Expect = 2e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773
|| ||||| ||||||||| |||| ||||| ||| ||| | | | | | | |||
Sbjct 37484 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAATGTAAAGTCC 37543
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| |||| ||||| || ||||| || | || || ||||| ||||| | ||| ||||||
Sbjct 37544 AAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAACAACGTCTCATTTTCGCCGGCAAA 37603
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893
||||| || || | |||||| | | || |||||||| ||||| || | || |||||
Sbjct 37604 CAGCTCGAGGATGGCCGCACCTTGAGTGATTACAACATTCAGAAAGAATCTACCTTGCAT 37663
>seq377
Length=202478
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/213 (70%), Gaps = 3/213 (1%)
Strand=Plus/Plus
Query 116647 GTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACAC 116706
||||||| |||||||| || |||||||| | || || ||||||||||||||||||
Sbjct 90356 GTACAAACGCGCCGAGGCATCCTTCTGGACAGCTGAAGAAGTGGACCTGTCCAAGGACCT 90415
Query 116707 GAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGC 116763
||||||| | || | || || |||| || | ||||| ||||| || ||
Sbjct 90416 TCACGACTGGCACAATCGTCTCAATGATGACGAACGATACTTCATTTCCCACGTCCTTGC 90475
Query 116764 CTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGA 116823
|||||||| || ||||||||| |||||||| || || |||| || ||| || ||
Sbjct 90476 ATTTTTCGCTGCTTCCGACGGCATTGTCAACGAAAACCTTCTCGAACGGTTCTCTGCTGA 90535
Query 116824 GGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGG 116856
|| || | | ||||| || || ||||| ||
Sbjct 90536 AGTCCAAATCCCAGAGGCCCGTTGTTTCTATGG 90568
>seq1350
Length=234104
Score = 91.5 bits (100), Expect = 2e-13
Identities = 131/182 (72%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || ||||||||||| ||||||||| | || ||||| | |||| | |
Sbjct 96402 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACAATC 96461
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | || || || ||||||||| ||||||| || || |
Sbjct 96462 GACAACG-TCAAGTCCAAGATCCAAGATAAGGAAGGCATCCCCCCGGACCAACAGCGCTT 96520
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| || || || || | || || || | || ||||||||||| ||
Sbjct 96521 GATCTTCGCCGGCAAGCAACTTGAGGATGGCCGAACACTGAGTGATTACAACATCCAAAA 96580
Query 40878 GG 40879
||
Sbjct 96581 GG 96582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515209700646000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |