Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq883 104 3e-17 >seq883 Length=160511 Score = 104 bits (114), Expect = 3e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||||||||| ||||||||||| ||||||||||| |||| ||||| || | || Sbjct 38356 CAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAAAGAGTGCGTCCATC 38297 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || | ||||| || || || || | |||||| || || | || | | ||| || || Sbjct 38296 TTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGAATACCCTCTTTATC 38237 Query 43091 CATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149 | ||| ||| |||| ||| | | | ||||| ||||| || || | ||| || | Sbjct 38236 CTGGATCTTTGACTTGA-CGTTGTCAATAGTGTCCGAAGATTCAACTTCCAACGTAATAG 38178 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || || | ||||| |||||||| ||||| Sbjct 38177 TCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 38144 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || ||||| || ||||| ||| ||||| || |||| || || ||||| || || || Sbjct 37878 TCTTTTTGGATGTTGTAGTCACTGAGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAA 37819 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| || || ||||||| || | | ||||||||| ||| || || | | Sbjct 37818 ATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGTCCTGGATCTTGGACTTCACATTG 37759 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | || ||||| || || || || | |||||||| ||||| || || ||||| || Sbjct 37758 TCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACG 37699 Query 43173 AAGATTTGCAT 43183 ||||||||||| Sbjct 37698 AAGATTTGCAT 37688 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || || || || ||||| || |||| |||| || || |||||||| Sbjct 38107 CTCCTTCTGGATGTTATAGTCGCTGAGAGTTCGACCGTCTTCTAATTGTTTTCCAGCGAA 38048 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | ||| || ||||| | ||| | | |||||||| ||| | || | || | | Sbjct 38047 GATCAATCGTTGTTGGTCCGGCGGAATTCCTTCCTTGTCT-TGAATCTTCGATTTTACAT 37989 Query 43112 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| |||||||| || | |||||||| ||||| || | ||||| | Sbjct 37988 TGTCGATCGTGTCTGATGATTCCACTTCCAGTGTGATGGTCTTGCCAGTCAAGGTCTTGA 37929 Query 43171 CAAAGATTTGCAT 43183 ||||||||||||| Sbjct 37928 CAAAGATTTGCAT 37916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571807057113000