Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq883 111 1e-19
seq256 82.4 5e-11
>seq883
Length=160511
Score = 111 bits (122), Expect = 1e-19
Identities = 155/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGT--CGGACAGCTGACGGTCGT 34235
|| |||||||| | ||| |||||| || |||||||||| | || || || ||| |||
Sbjct 37899 AGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTGAGAG-TG-CGGCCGT 37842
Query 34236 CGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGT 34295
| || | |||||||| || |||||||| || || |||||| || | | |||||||
Sbjct 37841 CTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGAATACCTTCCTTGT 37782
Query 34296 CGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355
| ||||| ||| | || | | || | |||| | || ||||| || | |||||||
Sbjct 37781 CCTGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGG 37722
Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| |||||||| ||||| || || ||||| |||||
Sbjct 37721 TCTTGCCGGTAAGAGTCTTGACGAAGATTTGCAT 37688
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTC 34236
|| |||| || || ||| ||||||||| |||||||| || || | || ||| | ||
Sbjct 37671 AGGACCAAATGCAAGGTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTG-CGGCCATC 37613
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|| | ||| ||||| ||||||||||| || || || || || | || ||||||||
Sbjct 37612 CTCGAGCTGTTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTC 37553
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||||| || | | || | |||| | || ||||| || | ||||||||
Sbjct 37552 CTGAATCTTGGACTTTACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGT 37493
Query 34357 TTTGCCGGT 34365
||||||||
Sbjct 37492 CTTGCCGGT 37484
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || |||| ||||| || | ||| || || ||||| || |||||||| ||
Sbjct 38370 CCACCACGAAGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAA 38311
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || ||||| ||||||||||| || || | ||||| || || ||
Sbjct 38310 AGAGTGCGTCCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGA 38251
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||| || || |||||| ||| | | | | || | || | ||||| ||
Sbjct 38250 ATACCCTCTTTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACT 38191
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||| || || || ||||| | || || ||||||||||||||
Sbjct 38190 TCCAACGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 38144
>seq256
Length=205955
Score = 82.4 bits (90), Expect = 5e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || ||||| | ||| |||||||| || || || ||||| ||||||||||||||
Sbjct 110823 TCCTCCCCGCAGGCGCAGGACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGA 110764
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
||| ||| | || || | |||||||| ||||| || || || |||||||| ||
Sbjct 110763 CAGAGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGG 110704
Query 34282 CACGCTCTCCTTGTC 34296
| || ||||||||
Sbjct 110703 GATGCCTTCCTTGTC 110689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323066192276000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |