Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq883 114 1e-20 seq256 87.8 1e-12 >seq883 Length=160511 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| | | ||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct 38370 CCACCACGAAGTCTCAACACCAAATGCAGAGTGCTCTCCTTCTGAATATTGTAGTCAGAA 38311 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || |||| ||| || || || || ||||| |||||||| || || || Sbjct 38310 AGAGTGCGTCCATCTTCCAATTGCTTGCCTGCAAAGATCAATCGCTGTTGATCCGGTGGA 38251 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | |||||| || ||| || ||| ||| || | | ||||| | || || Sbjct 38250 ATACCCTCTTTATCCTGGATCTTTGACTTGACGTTGTCAATAGTGTCCGAAGATTCAACT 38191 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 |||| ||||| ||||| || |||| ||||| |||||||| |||||| Sbjct 38190 TCCAACGTAATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCATG 38143 >seq256 Length=205955 Score = 87.8 bits (96), Expect = 1e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||| ||| |||||||||||||||||||||| ||| ||| | || || Sbjct 110804 ACCAGGTGCAACGTTGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCTTCA 110745 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 ||||| || |||||||| |||| || || ||||| ||||| | || |||||||| Sbjct 110744 AGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGGATGCCTTCCTTGTC 110689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395068097905975