Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq73 432 3e-116
seq883 116 3e-21
>seq73
Length=89549
Score = 432 bits (478), Expect = 3e-116
Identities = 1032/1544 (67%), Gaps = 38/1544 (2%)
Strand=Plus/Minus
Query 22454 TTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGT 22513
|| || ||||| || || || | ||| || || || ||| |||||||| ||| | ||
Sbjct 18281 TTGACGACTTGGAATTCACCAGCCAACACACGACGGGAGTAGATGTTGGACGTGTATGGC 18222
Query 22514 TCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAAC 22573
||||| |||| ||||| |||| || |||| ||| || || || ||||| || || |
Sbjct 18221 TCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGATGCAGTAGGCATAGGGGCAACA 18162
Query 22574 AGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGA--GCATCGACCAGTCCC 22631
|| || ||||| | | || || || | ||| | | || | ||||| ||| ||||
Sbjct 18161 AGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCTTTCAATGCATC--CCAATCCC 18104
Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCG 22691
| ||||| || || || ||||| ||||||||| || || | | || | |||
Sbjct 18103 ATAGATCTGAAGGAGTAACATT---CCACATATCATACTGAAGGATACCTTGTGAGACCG 18047
Query 22692 GGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCA 22751
||||||| || || || || || ||||| | | | ||| |||||||| ||| ||
Sbjct 18046 GGCTGCCCTCATAGGTCTCATAGGGACCTTGTTCCTTGGCGAGTTCGCATGACGCAGTCA 17987
Query 22752 ACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACG 22807
|| | | || || || ||||| |||| |||| | || ||| || ||
Sbjct 17986 GAGCTGCATGGTAGATGGTTTCGAAAATTTGGATGTTGAGTTGACGGGCCTCTGGAGAG- 17928
Query 22808 CTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCG 22867
||| | || | ||||| | ||| || || || | ||||||||| || | |||
Sbjct 17927 ---TCGAAAGGAAGACGCAAAGCAAGGAAGGCATCTGCAAGACCCTGAACACCAAGACCA 17871
Query 22868 ATCGGTCGGTTTTTCAGATTCGACACTT--TTGCCTCGGGCAAAGGATACCAATTCGAAT 22925
| ||||||| | | || | ||| | || ||||||| ||| || | || ||
Sbjct 17870 ACAGGTCGGTGTCGGAAGTTG--CTCTTCCTGGCTTCGGGCACAGGGTAGTAGTTGATAT 17813
Query 22926 CGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGT 22985
|||| | |||||||||||| || || | || || | ||||||
Sbjct 17812 CGATGATCTTGTTCAAGTTTCGAGTGACGACTTGGGTAACTTCATGAAGACGGCCAAAGT 17753
Query 22986 CGTAAACGCCC---GATTGTACAACAAACTTGTTGACG-GCGATCGAGGCAAGATTGCAT 23041
| || | || | ||| | || || | | || | || | ||||| ||||||||
Sbjct 17752 CATATTCACCTCGGGCTTGATCGACGAAGGT-TGGAAGAGCCAGAGAGGCGAGATTGCAG 17694
Query 23042 ACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTT 23101
|| || | ||| ||| || ||||||| |||||||| || || |||||| | |
Sbjct 17693 ACAGCGATCTCATCTGGGGCACTGTACTCGACAATTTCCGTGCACAGATTGGAGCTCCGG 17634
Query 23102 ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTAC 23161
|| || |||| || |||||||||| || ||||| | ||||||||| ||||| ||
Sbjct 17633 ATTGTCCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAA 17574
Query 23162 GGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACA 23221
|| || || |||||| ||| | || | |||||| ||||| |||| || | ||
Sbjct 17573 GGAGTCCCGGTCTCGGTCTGTGCTTCTAGGATCGCATACCACAACTTCTGGGCCTTGAC- 17515
Query 23222 CGTCGCACGTACCTG--CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCAC 23279
|||| ||| |||| || |||| ||| |||| || || | || || ||||| | |
Sbjct 17514 CGTCTGACG-ACCTCGTCCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGC 17456
Query 23280 CGTA-ACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTC 23337
| || ||| || || ||||| || | | ||| ||||| | ||| |||| | ||
Sbjct 17455 CATAGACA-TCAGCAAGGCCCGGTGCCT-CATGAGGACAGAACAGAGTCCAGTCTTGGTT 17398
Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397
|| || || |||||||| || |||||||| |||| || || || |||| || |||||
Sbjct 17397 CTTCTCGACACGTCTCATGAATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGC 17338
Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457
||| ||||| || || ||| ||||||| ||| | || | || || || ||||| ||
Sbjct 17337 GCGAACCTCTTCCTTTCCGTGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTG 17278
Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517
||| ||||| || || | |||||| || || || | ||||||||| ||||| || || ||
Sbjct 17277 CCATGGCTCCAGATAGATGGCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATA 17218
Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTAC 23577
|||||| ||||||||| | || | ||||| || | |||||| ||||| | ||||
Sbjct 17217 ACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGT 17158
Query 23578 GCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCC 23637
|| || | | ||||| | || |||| | ||| ||| || || || || || |
Sbjct 17157 CCCGGCAATATAGGAACCAGTAGCACGAATGCAATGAGCGTTGAGGCCAATACCGCCAGC 17098
Query 23638 CGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC 23697
| || || ||||| || || || ||||||||||| || ||||| |||||||||||
Sbjct 17097 AGTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTC 17038
Query 23698 TTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAG 23757
||| | |||||||||| || || |||| ||| | || || || |||| ||||||
Sbjct 17037 TTTCATGTCGACCAAGAAGCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAG 16978
Query 23758 TGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGC 23817
|| || |||||| || ||| | | ||||| || ||||| || || || ||
Sbjct 16977 AGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTT 16918
Query 23818 ATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877
|| ||||| ||||| || || || | || || ||||| | ||||| ||| ||||||||
Sbjct 16917 CTCGATGTCATCTCCATGGATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTC 16858
Query 23878 GAC--CGTG-ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934
| | | || ||| ||| |||| ||||||||| | || || || || || || ||
Sbjct 16857 GGCCACTTGTTTGCC---AATCTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAA 16801
Query 23935 ATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978
|| | ||||| ||||| || |||| || |||||||| ||||
Sbjct 16800 GTATTGGTAGTTGAAGTCTCGGTCGTAAACGATGGCCGAGTTCA 16757
>seq883
Length=160511
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || ||||| |||| ||||| || ||||| | || || ||| | ||
Sbjct 37916 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACCATCACACTGGAAGTGGAATCATCA 37975
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || ||| || || ||||||||||| | ||||| |||||
Sbjct 37976 GACACGATCGACAATGTAAAATCGAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAA 38035
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| || | || |||||||| ||||| || |||||| | ||| | ||||| ||||||
Sbjct 38036 CAACGATTGATCTTCGCTGGAAAACAATTAGAAGACGGTCGAACTCTCAGCGACTATAAC 38095
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || || |||||||| ||||| || ||
Sbjct 38096 ATCCAGAAGGAGTCGACTCTCCATCTCGTCCT 38127
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||||| || ||||| || ||||| | || || || | |
Sbjct 37688 ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 37747
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || || | || |||||||||||| | || ||||||||
Sbjct 37748 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAAGGTATTCCTCCCGACCAA 37807
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || || || ||||| || | |||||| ||| | || || || |||
Sbjct 37808 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAAGACGGCCGCACTCTCAGTGACTACAAC 37867
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| |||||||||||||||||||| ||||| ||| | || | || ||||
Sbjct 37868 ATCCAAAAAGAATCGACTCTTCACCTGGTCCTTCGTCTCCGTGGTGGTA 37916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445758181182000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |