Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq73 98.7 2e-15
>seq73
Length=89549
Score = 98.7 bits (108), Expect = 2e-15
Identities = 182/267 (68%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832
|||| || || ||| | || ||||||||||||||||| || || ||| |||||
Sbjct 17124 ATGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGT 17065
Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892
|| ||||| ||||||||||| || |||| | | | | | |||||| ||||| | |||
Sbjct 17064 GTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTG 17005
Query 94893 GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952
||| || || ||| ||||| || || || || ||||| || | | | ||
Sbjct 17004 AGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGA 16945
Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012
|||||| | || || || || | | |||||| ||| || ||||| || |||||
Sbjct 16944 CATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCCAC 16885
Query 95013 ACGCATAATCATGTCCTGAGGGCGCTC 95039
|||||| | ||||| || || | |||
Sbjct 16884 ACGCATGAGCATGTGTTGCGGTCTCTC 16858
Score = 89.7 bits (98), Expect = 1e-12
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 93610 TACATGTTGGACGTTAAAGGCTCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGAT 93669
|| ||||||||||| | ||||| ||| |||| |||||||| ||| || | ||||||
Sbjct 18242 TAGATGTTGGACGTGTATGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGAT 18183
Query 93670 GCAGTAGGCATGGGAGCAACAAACATTGAATTGTGAACACCATACTTCATAATGTCCCTT 93729
||||||||||| || ||||||| | || ||| ||||||||| || ||| || |
Sbjct 18182 GCAGTAGGCATAGGGGCAACAAGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCT 18123
Query 93730 CTCAATTGCTCCCAATC 93746
||||| ||||||||
Sbjct 18122 TTCAATGCATCCCAATC 18106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989565298408625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |