Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq73 98.7 2e-15 >seq73 Length=89549 Score = 98.7 bits (108), Expect = 2e-15 Identities = 182/267 (68%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832 |||| || || ||| | || ||||||||||||||||| || || ||| ||||| Sbjct 17124 ATGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGCACAAGTCTTGAGAGT 17065 Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892 || ||||| ||||||||||| || |||| | | | | | |||||| ||||| | ||| Sbjct 17064 GTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAAGCATGAGGACAATTG 17005 Query 94893 GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGA 94952 ||| || || ||| ||||| || || || || ||||| || | | | || Sbjct 17004 AGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGTGAAGCACTTCTGGGA 16945 Query 94953 CATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCAC 95012 |||||| | || || || || | | |||||| ||| || ||||| || ||||| Sbjct 16944 CATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATGGATGCCAACTGCCAC 16885 Query 95013 ACGCATAATCATGTCCTGAGGGCGCTC 95039 |||||| | ||||| || || | ||| Sbjct 16884 ACGCATGAGCATGTGTTGCGGTCTCTC 16858 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 93610 TACATGTTGGACGTTAAAGGCTCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGAT 93669 || ||||||||||| | ||||| ||| |||| |||||||| ||| || | |||||| Sbjct 18242 TAGATGTTGGACGTGTATGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGAGAGGTGGAT 18183 Query 93670 GCAGTAGGCATGGGAGCAACAAACATTGAATTGTGAACACCATACTTCATAATGTCCCTT 93729 ||||||||||| || ||||||| | || ||| ||||||||| || ||| || | Sbjct 18182 GCAGTAGGCATAGGGGCAACAAGGAGAGAGTTGCGAACACCATGTTTAGCAATCTCAGCT 18123 Query 93730 CTCAATTGCTCCCAATC 93746 ||||| |||||||| Sbjct 18122 TTCAATGCATCCCAATC 18106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989565298408625