Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq73 176 6e-39
>seq73
Length=89549
Score = 176 bits (194), Expect = 6e-39
Identities = 672/1045 (64%), Gaps = 10/1045 (1%)
Strand=Plus/Minus
Query 63042 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63101
|| || ||||| ||||| || |||||||| ||||| || | ||||| || || || ||
Sbjct 17615 TGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATATAAGGAGTCCCGGTCTCGGTC 17556
Query 63102 TGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATCTCCT 63160
|| | ||||| ||||| | ||| | | || | ||||| | | | | ||| |
Sbjct 17555 TGTGCTTCTAGGATCGCATACCACAACTTCTGG-GCCTTGACCGTC--TGACGACCTCGT 17499
Query 63161 TTCTCTTTCGTATAGAGT--ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 63218
||||||| ||| || ||| | ||||| || || || | |||| | |
Sbjct 17498 CCCTCTTTCTCATACTGTTCATAGAGGGCATCGAATTCCTCGCCATAGACATCAGCAAGG 17439
Query 63219 CTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63278
| || |||| ||||| | || | ||| ||| || | || || ||| ||||
Sbjct 17438 CCCGGTGCCTCATGAGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGTCTCATG 17379
Query 63279 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCT 63338
|| ||||| ||| ||||||| || ||| | || | | | | || || |||||
Sbjct 17378 AATAGATCCGGAGTCCAAAGTGCATAAAACAAGTCACGGGCGCGAACCTCTTCCTTTCCG 17319
Query 63339 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63398
|||||| | || | || | | | | ||| | ||||| || |||| || |||
Sbjct 17318 TGGTTCTTTCTCAGGTTCAGCCAATCGAAGACATCCGCGTGCCATGGCTCCAGATAGATG 17259
Query 63399 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63458
|| | | || || || || || || ||||| || | || | || ||||| || |
Sbjct 17258 GCAAAGGCACCGGGACGCTTATTGCCACCCTGGTCCACATAACGGGCAGTGTTGTTGAAG 17199
Query 63459 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCA 63518
|| | | ||| ||||| | ||| || || | || ||||| |||| |||||| |||
Sbjct 17198 ACACGAAGCATGGGAATGAGACCATTGGAAGTGCCGTTGGTCCCGGCAATATAGGAACCA 17139
Query 63519 CTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63577
| |||||||| | | | | | || || || || || || | || ||||| | ||
Sbjct 17138 GTAGCACGAATGCAA-TGAGCGTTGAGGCCAATACCGCCAGCAGTCTTGGAGATCATAGC 17080
Query 63578 GCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAA 63637
|| || | ||||| || || || || ||||| || || |||||| | | ||
Sbjct 17079 ACAAGTCTTGAGAGTGTCGTAAATTCCCTCAATGCTGTCCTCTTTCATGTCGACCAAGAA 17020
Query 63638 ACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 63697
|| |||| ||| | | | ||| || ||||| || | || ||||| ||||| ||
Sbjct 17019 GCATGAGGACAATTGAGGTTGCGGAGTGCCGGCATTGAACAGAGTTGGAGAGGCGTGGGT 16960
Query 63698 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63757
|| || || | || | || ||||| ||||| || || || || || | |||
Sbjct 16959 GAAGCACTTCTGGGACATGAGGTTGTAGGTCTCTATCGCCTTCTCGATGTCATCTCCATG 16900
Query 63758 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTAT 63817
|| || ||||| |||||||| | |||||| || ||||| || | | || ||| ||
Sbjct 16899 GATGCCAACTGCCACACGCATGAGCATGTGTTGCGGTCTCTCGGCCACTTGTTTGCCAAT 16840
Query 63818 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 63877
|| | || || ||| |||||||||| || || || || || | ||| ||||||||
Sbjct 16839 CTTGAGCAGATATGATCTTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCG 16780
Query 63878 TTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAAT 63937
||||||| || |||| || |||| ||| || | | |||| | || ||| |
Sbjct 16779 GTCGTAAACGATGGCCGAGTTCAGCTCATCAGCATGTCTCATAAC-ACATTCATACGTCT 16721
Query 63938 ACTTGAA-ATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCT 63996
|| | | || |||||||| || ||| || || || || | ||||| | | | ||||
Sbjct 16720 CCTGGGAGATCATCGGAGAGTGCTTCTTGTTCTTGGGGTTGATATAGTAGTAGAGATCCG 16661
Query 63997 CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGG 64056
|| ||| | ||| |||| || || | |||||| ||||| || | ||| || | |
Sbjct 16660 ACACCACCGAAGAGAATTGTTTCTTAGTCTGCTTGTGGAGATTGGACACGGCGATACGCG 16601
Query 64057 CGGCTAGAATGGCATAATCCGGATG 64081
| || || ||||||||||| |||||
Sbjct 16600 CTGCGAGGATGGCATAATCGGGATG 16576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629805987738000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |