Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016-
09-12] 1,475 sequences; 33,409,556 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq883 109 5e-19
seq377 86.0 6e-12
>seq883
Length=160511
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | || | ||||| || || |||||||| ||||| || || ||
Sbjct 37914 CCACCACGGAGACGAAGGACCAGGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCACTG 37855
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||||||| || || || ||| | || |||||||| || ||||||||
Sbjct 37854 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCGGGAGGA 37795
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| ||||| ||||| ||| || || | | || | || ||| ||| ||| |||
Sbjct 37794 ATACCTTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATCGCTGGACTCGACC 37735
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| || | ||||||||||| | || || ||||| |||||||||
Sbjct 37734 TCAAGAGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATTTGCATA 37687
Score = 107 bits (118), Expect = 2e-18
Identities = 131/176 (74%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
||||| ||||| |||||||| ||||| |||| |||| || ||||||||||| ||
Sbjct 37656 GTAGATTCTTTCTGAATGTTGTAATCACTCAAGGTGCGGCCATCCTCGAGCTGTTTGCCG 37597
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686
|| | || |||||||| ||||| ||||| |||||||| ||||| ||| | || | ||
Sbjct 37596 GCGAAAATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTC-CTGAATCTTGGACTT 37538
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCA 139742
|| | || | || ||| ||| ||| ||||| | ||| | |||||||||||||
Sbjct 37537 TACATTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCA 37482
>seq377
Length=202478
Score = 86.0 bits (94), Expect = 6e-12
Identities = 154/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896
||||| || | ||| || || || ||||| || || ||||| || || | || | |||
Sbjct 91066 GAGGCTGTTGTCATCGAGAAGGAATTTTTGACAGATGCTTTGCCTGTCGCTCTGCTTGGC 91125
Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956
|||||||| | ||||| | || || ||||| ||||| ||| | || | |
Sbjct 91126 ATGAACGCCAAACTGATGCAACAATATATTGAGTTCGTTGCCGACCGTCTTCTCCTTGCC 91185
Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016
||||| | ||| ||||| ||||| | || || || |||||| ||||||| ||
Sbjct 91186 CTCGGAAACAAGAAGTACTACAATGCCCAGAATCCTTTCAGCTTTATGGACAACATCTCA 91245
Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
| | ||| || |||||||| ||||||| ||||| || || |||
Sbjct 91246 TTGGCGGGAAAGACAAACTTCTTCGAGAAGCGTGTCGGTGATTAC 91290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496054853820000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |